Pairwise Alignments

Query, 348 a.a., TRAP transporter solute receptor, unknown substrate 3 from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 325 a.a., periplasmic C4-dicarboxylate transport protein from Sinorhizobium meliloti 1021

 Score = 57.0 bits (136), Expect = 7e-13
 Identities = 65/277 (23%), Positives = 110/277 (39%), Gaps = 13/277 (4%)

Query: 12  AAVALGAPALTGFAQQSVTLKFHTFMAPQSNVYINMHKAWMDKVEKESGGRIKFEGYPAM 71
           AA  L A +  G A  + T+   +   P     +   K + + V++ + GR   E Y + 
Sbjct: 8   AAGLLVAASFMGNAANAQTVLRSSDTHPDGYPTVEGVKYFGELVKERTAGRYSVEVYHSA 67

Query: 72  QLGGTPVQLFDQARDGVVDIVWTLPGNTPGRFPRTEVFELPFMMNNAEATSKAFWEYITT 131
           QLG       +Q R GV+++         G    + V  LP++  + E   K     I  
Sbjct: 68  QLGEEK-DTIEQVRSGVIELNRVSMAPFNGTVKESIVPALPYLFRSEEHMHKVMDGAIGD 126

Query: 132 MAPDEYKEVQPIALQVHGPGM--FHMRSKQIKTAEDLRGSKVRGPTRQI-TKMLGYLGAI 188
                ++    + L  +  G   F+ + K I T ED++G K R     I   M+  LGA 
Sbjct: 127 QIKKAFEGAGVVVLAFYDAGARSFYNKQKPINTVEDMKGLKFRVIQSDIFVDMVAALGAN 186

Query: 189 PVGMPLPQIPDALSKGVIDGCVIPWEVVPSVKVHELTKFHSEFDPAGGALYTTTFVMGMN 248
              MP  ++   +  GVIDG    +    + K  E+ K +S  +     +    FV  MN
Sbjct: 187 ATPMPYGEVYSGIETGVIDGAENNFPSYDTAKHFEVAKNYSLDE---HTILPEVFV--MN 241

Query: 249 RNKYASLPPD----LKAIIDKNSGMETSGWLGKVQQA 281
           +  +  L P+     K     +   +   W  KV+++
Sbjct: 242 KAAFDKLTPEDQEIFKQAAKDSVAKQRELWAAKVKES 278