Pairwise Alignments

Query, 348 a.a., TRAP transporter solute receptor, unknown substrate 3 from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 325 a.a., C4-dicarboxylate transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score = 63.5 bits (153), Expect = 7e-15
 Identities = 69/264 (26%), Positives = 112/264 (42%), Gaps = 26/264 (9%)

Query: 12  AAVALGAPALTGFAQ-QSVTLKFHTFMAPQSNVYINMHKAWMDKVEKESGGRIKFEGYPA 70
           AA A+ A +  G A  Q  +L+F T     +   I   K + ++V + SGGRI       
Sbjct: 6   AAAAMAALSFCGIANAQEYSLRFSTSQVNPNEPIIKAMKTYAERVGERSGGRIAITVMTG 65

Query: 71  MQLGGTPVQLFDQARDGVVDIVWTLPGNTPGRFPRTEVFELPFMMNNAEATSKAFWEYIT 130
            QLG    ++ +    G   +  T  G      P   +   P++  +  AT + F     
Sbjct: 66  DQLGAQK-KVNEMVMSGASLLSATDYGQLGQFVPDLSILAGPYVYPDLAATDRLF----- 119

Query: 131 TMAPDEYKEVQPIALQVHG------PGMFHMR----SKQIKTAEDLRGSKVRGPTRQI-T 179
             A D YK++    L+  G       G+F  R    +K +++  DL G  +R P+  I  
Sbjct: 120 --ASDLYKDLSG-KLEARGIKIIMPNGLFGYRHIIANKPVRSPADLAGVTIRVPSSPIMM 176

Query: 180 KMLGYLGAIPVGMPLPQIPDALSKGVIDGCVIPWEVVPSVKVHELTKFHSEFDPAGGALY 239
              G  GA P  +P   + +AL  GV+D    P+  +   K++E  K  S+    G  + 
Sbjct: 177 ATFGNYGARPTELPWGDVYNALQTGVVDAAEGPFGSIAGAKLNETRKVISK---TGHQIM 233

Query: 240 TTTFVMGMNRNKYASLPPDLKAII 263
            T +V   +   + SLP DL+ I+
Sbjct: 234 FTAWV--ASSQFFNSLPEDLQTIL 255