Pairwise Alignments

Query, 348 a.a., TRAP transporter solute receptor, unknown substrate 3 from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 331 a.a., TRAP-type large permease component from Sinorhizobium meliloti 1021

 Score = 68.9 bits (167), Expect = 2e-16
 Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 17/215 (7%)

Query: 4   RRTLL---QSGAAVALGAPALTGFAQQSVTLKFHTFMAPQSNVYINMHKAWMDKVEKESG 60
           RRT L    +GAA++L  P+L   AQ++ TL+    + P  + + N      + ++ E+ 
Sbjct: 5   RRTFLGGVAAGAALSLATPSLVR-AQETRTLRLG-IVTPPGHPWNNAALKVGEALKAETN 62

Query: 61  GRIKFEGYPAMQLGGTPVQLFDQARDGVVDIVWTLPGNTPGRFPRTEVFELPFMMNNAEA 120
           GR+    +PA QLG     L  Q + G +D+ W +      R P       P+++++   
Sbjct: 63  GRLSISVFPAGQLGNEAAML-QQMQSGALDLGWIMTAELGSRIPAVAAINAPWVVDSTAK 121

Query: 121 TSKAFWEYITTMAPDEYKEVQPIALQVHGP--GMFHMR----SKQIKTAEDLRGSKVR-G 173
            +K   E +     D    V P      G   G+  MR    +K+I   +D+ G K+R  
Sbjct: 122 VAKLVREPVAMKLLD----VLPAETGTVGLAWGITTMRVVFSAKEIAGLDDINGMKLRIN 177

Query: 174 PTRQITKMLGYLGAIPVGMPLPQIPDALSKGVIDG 208
            T         LGA P  +P P + DA+S G +DG
Sbjct: 178 TTPAYRDFYQLLGAAPTPIPTPAVFDAMSNGQVDG 212