Pairwise Alignments

Query, 389 a.a., ABC-type multidrug transport system, permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 386 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  178 bits (452), Expect = 2e-49
 Identities = 102/357 (28%), Positives = 172/357 (48%), Gaps = 1/357 (0%)

Query: 21  RAMLGDVGAIMLLFVGGIVYSFFYPLPYSRESVQQVPVAVVDQDLSAISRQITRYVAAHP 80
           +A++ D    + LF G + Y+  YPLPY  +   +  + VVD D +++SR++ R+  A P
Sbjct: 12  KAIVADKAIAVTLFGGVLFYALLYPLPYLNQVPTEQALVVVDLDNTSLSRELIRHADASP 71

Query: 81  AVDTQRVTPDLREAQDLLWKNEIAGVLMIPQGLESKVLSGRRAEVDISGNGVYMMMNKVA 140
            +   R    + EAQ  +   +  G+L+IP G +  +L G+ A +   G+  Y ++    
Sbjct: 72  KIRVARAAGSVAEAQHYIASGDFHGLLVIPAGFKRDLLLGKGATLSYGGDASYFLVYSAL 131

Query: 141 LNGLAEAVGTVSAGIELKRLAAGTPSPAQAMAQRQPVNVNAVALFNVREGYGAYIVPGVA 200
           + GL  A    +  ++L  + +   S A A     P+++NAV  +N   GY  Y+VPG+ 
Sbjct: 132 VEGLVTAGMDAARSVQLLGMLSRGESFAGASLSLLPMHLNAVPAYNPGLGYTPYVVPGLF 191

Query: 201 VLIIQQTLLLAITLL-FGTWRERGAFPVRRSSAAYFGMLLAFATVAFANSLYFFGFVLWW 259
           +LI+ QTLL+   +L  G WR+ G +    S     G + AF  +  A   ++ G+   W
Sbjct: 192 LLILHQTLLIGTGILGAGQWRKAGYWQQVSSLELLIGRIAAFGLIYAALGAFYMGWCYHW 251

Query: 260 QDYPRAGNFGGLLLFAALFALCVAALGMLLGSLFRTRERSVQLLLCTALPFMFLSGLSWP 319
                    G +  F   F L  AA G+    LFR R+   Q++L  ++P +F+SG  WP
Sbjct: 252 YGVSVQAGLGDIAAFIVPFYLATAAAGVAASCLFRRRDMPTQVMLLASMPILFVSGFVWP 311

Query: 320 VEALPPALQALRWLVPSTAGVQGFIALNQLGASLAQVATEAAALGAVFVFSAVVGLW 376
           +  +P  L      +P+   + G + LNQLG     V +E   L  + +    +  W
Sbjct: 312 LSLIPEPLVMAAQTIPAVPAIFGMLKLNQLGTGFDGVFSEWLTLWLLALVYLALAWW 368