Pairwise Alignments

Query, 231 a.a., Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 251 a.a., putative high-affinity branched-chain amino acid transport ATP-binding protein from Phaeobacter inhibens DSM 17395

 Score =  180 bits (456), Expect = 3e-50
 Identities = 94/233 (40%), Positives = 147/233 (63%), Gaps = 5/233 (2%)

Query: 2   LKIENLHAYYGKSHVLHGVSFDVQPGEIVALLGRNGSGRSTTAKAVMGL---VECQGSIH 58
           L + ++HAYYG+S+++ G+SF+V  GEI+ALLGRNG+G+++T +++      +  +G I 
Sbjct: 21  LSVWDMHAYYGESYIVQGISFNVHEGEILALLGRNGAGKTSTLRSIARTGSPMVTKGEIW 80

Query: 59  WKGQQIMGKKAYEVAHLGLGYVPENRDIFPTLTVHQNLMLGQKGSGKGSRWSFEDMYGMF 118
              Q +    ++E +  GLG VPE+R I P LTV +NL L Q     G  WS E +Y +F
Sbjct: 81  LDHQPLHKMSSHEASAAGLGLVPEDRRIIPGLTVEENLQLAQIAPPVG--WSIERLYELF 138

Query: 119 PRLRERQHTEAGVLSGGEQQMLTLCRTLMGDPDLIIIDEPTEGLAPKIVELVGQYLQTLK 178
           PRL ER+  E   LSGGEQQML + R L  D  ++++DEP EGLAP IV+ + + L  +K
Sbjct: 139 PRLGERRKQEGVTLSGGEQQMLAIARALARDIKVLLLDEPYEGLAPVIVDEIEKTLIHIK 198

Query: 179 SRGVSVLLIEQKLTIAMAISDRALVMGHGSIVFQGTPESLRADPYTRKEWLEV 231
            +G++ +++EQ    A+ ++DRA+++  G IVF G    +  +   R E+L +
Sbjct: 199 QQGITTVIVEQNAVRALELADRAVILDTGGIVFDGAAAEVLENEELRAEYLAI 251