Pairwise Alignments

Query, 473 a.a., RND efflux system, outer membrane lipoprotein, NodT family from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 504 a.a., RND efflux system, outer membrane protein, NodT family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  152 bits (385), Expect = 2e-41
 Identities = 137/474 (28%), Positives = 213/474 (44%), Gaps = 26/474 (5%)

Query: 1   MLVVAASAAVLSACSVTKPPASVPVDLPATWYAPPLAHQGSTEQLTTWWGRFDDPVLTNW 60
           M  +   AA+LS C++        +DLP+ W A   A  G       WW  F D  L   
Sbjct: 5   MTAMLLGAALLSGCAIGPDYQRPGMDLPSAWRAES-ADAGMVAG-EKWWTLFGDATLDAL 62

Query: 61  VARAQAQSPSVASARAQVFAARAARLGVEAQAGPQLNAVANA------SRGLTDPTMPLG 114
              A A +  +A+A A V A+RA      +   P +    ++       RG   P     
Sbjct: 63  EEEALAANGDLATAMANVDASRAQLTVATSYLLPSITGQGSSVRQRGSERGQNPPVEGRE 122

Query: 115 -TSLN-AGLQASWAIDLWGGNDARRGSAEAQQDAAGAGWHQARVLVASELAQLYFAQRLC 172
            T L+ A   AS+ +DLWG       +A A      A +   R+ V S++AQ YF  R  
Sbjct: 123 VTDLHKASALASFELDLWGKYRRAHEAARAGLLGTEAAYATVRLAVVSQVAQSYFGLRAA 182

Query: 173 REQLAVAARDRDSRGVTAENNAISERAGLTAPAVAALARASGAEGAARYRQQNETCERQV 232
             QL +A +   SR  + +       +GLT+      A+A  A   A  RQ  +      
Sbjct: 183 DRQLDIARQTLTSREESLKIREARFNSGLTSELDYRQAQAETASARASVRQLEQAVAAAE 242

Query: 233 KSLTALTG-VPEPEVRQRLAAAPDLQALLQSPRMDQLLSVNAVPAEVIRQRPDVYRAQRE 291
            +L++L G  P   V +      D++     P++        +PA ++ +RPDV RA+ +
Sbjct: 243 TALSSLLGRSPRDIVERSPERGLDIETFAVPPQIPA-----GLPAGLLARRPDVARAEAD 297

Query: 292 LVAASEDVGVARAALLPSLSLSG-----SVLRNRFSGGGNEGTFNTWSAGPLTLSLPLLG 346
           L  A+  +GVA+A LLP++SL+G     S+   R     +     TWS G  + ++PLL 
Sbjct: 298 LHYATASIGVAKADLLPAISLTGLMGYESIDLTRLVSSSS----GTWSYGA-SATMPLLD 352

Query: 347 RDALRANTDSAQARYEAAAIAYAGSLRQAVAEVEQALVSISSLRERVASTDTAVAGYGQS 406
                AN D A A+  AA  AY  ++R A  E + ALV+    R+ V +  T VA   +S
Sbjct: 353 FGRTLANIDMADAKQRAALAAYEQAVRDAFRETQDALVANRKTRQVVDAQATQVAALERS 412

Query: 407 FQATEARYRVGLASLNELEEARRLKLAADSSAVALQQERINAWIQLYVALGGGF 460
                 RY  G +S  E+ +A R    A  + V  ++ +++A +Q+  +LGGG+
Sbjct: 413 LTLARLRYENGYSSYLEVLDAERSLFQAQLNLVEARRNQLDAVVQVCKSLGGGW 466