Pairwise Alignments

Query, 473 a.a., RND efflux system, outer membrane lipoprotein, NodT family from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 541 a.a., RND efflux system, outer membrane protein, NodT family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  129 bits (324), Expect = 2e-34
 Identities = 136/482 (28%), Positives = 214/482 (44%), Gaps = 51/482 (10%)

Query: 10  VLSACSVTKPPASVPV-DLPATWY--APPLAHQGSTEQLTTWWGRFDDPVLTNWVARAQA 66
           +L+AC+   P  S P  D+P  W   + P+A   +     TWW  F+DPVL + V  A++
Sbjct: 37  LLTACAKVGPDFSAPGGDVPDVWQDASHPVASSDADVD-GTWWNTFNDPVLDSLVTEARS 95

Query: 67  QSPSVASARAQVFAARAARLGVEAQAGPQLNAVANASRGLT-------DPTMPLGTS--- 116
            + S+  A  +VF ARA RLG  A  G         + GLT        PT P  T+   
Sbjct: 96  ANLSLHLAALRVFEARA-RLG--AAVGNLYPQTQQGTGGLTWTHPSDRAPTAPQPTTGRD 152

Query: 117 ------LNAGLQASWAIDLWGGNDARRG--SAEAQQDAAGAGWHQARVLVASELAQLYFA 168
                  +AGL  +W +D WG    RRG  +A+A   A+ A    A V V++E+A+ Y  
Sbjct: 153 NPDYVQTSAGLDVAWELDFWG--KFRRGIEAADADLRASMADHQTALVSVSAEVARSYIL 210

Query: 169 QRLCREQLAVA----ARDRDS-RGVTAENNAISERAGLTAPAVAALARASGAEGAARYRQ 223
            R  ++QLA+A    A  R+S R  TA  N      G T+      A +   +  AR   
Sbjct: 211 YRTVQKQLAIAETNVAIQRESLRIATARFNY-----GATSERDMRQALSLLRDTEARIPN 265

Query: 224 QNETCERQVKSLTALTGVPEPEVRQRLAAAPDLQALLQSPRMDQLLSVNAVPAEVIRQRP 283
              +      +L  L G    ++  RL  AP        P     ++V  +PA+++R+RP
Sbjct: 266 LAHSLRETRNALCVLLGKAPQDISARLGDAP-------IPTAPTHVAVG-IPADLLRRRP 317

Query: 284 DVYRAQRELVAASEDVGVARAALLPSLSLSGSV--LRNRFSGGGNEGTFN---TWSAGPL 338
           DV++A          +GVA+A   P+ +L G V    +     G   TF+   T   GP 
Sbjct: 318 DVHKALATAAGQCARLGVAKADFYPAFTLGGFVGFTASNVGAFGLGDTFSNGFTAYGGP- 376

Query: 339 TLSLPLLGRDALRANTDSAQARYEAAAIAYAGSLRQAVAEVEQALVSISSLRERVASTDT 398
            LSLPL     + +N  +  AR++ +  +Y  ++  A+ E E A+      + R A    
Sbjct: 377 GLSLPLFNYGRIVSNVRAQDARFQQSLTSYRETVLVALRETEDAIDRFIQAQGRTALLTE 436

Query: 399 AVAGYGQSFQATEARYRVGLASLNELEEARRLKLAADSSAVALQQERINAWIQLYVALGG 458
           + +   +S Q    +Y+ G      +  A R     + +  A + E   + + ++ ALGG
Sbjct: 437 SASDAARSMQLALIQYQEGSTDFTTVLTAARDLATREDALAAAKGEICQSLVAMFKALGG 496

Query: 459 GF 460
           G+
Sbjct: 497 GW 498