Pairwise Alignments

Query, 608 a.a., GTP-binding protein TypA/BipA from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 603 a.a., virulence regulator BipA (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  705 bits (1820), Expect = 0.0
 Identities = 361/607 (59%), Positives = 448/607 (73%), Gaps = 6/607 (0%)

Query: 1   MSKQIRNIAIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNNAIERERGITILAKN 60
           M + +RNIAIIAHVDHGKTT+VD+LL QSGT A   +  + VMD+N +E+ERGITILAKN
Sbjct: 1   MLENLRNIAIIAHVDHGKTTLVDKLLSQSGTLATRGEATERVMDSNDLEKERGITILAKN 60

Query: 61  CAVSWEGTHINIVDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALG 120
            A+ W    INIVDTPGHADFGGEVER LSMVD V+LL+DA +GPMPQTRFVTKKA A G
Sbjct: 61  TAIKWNDYRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQG 120

Query: 121 LKPIVVVNKVDKPGANPDKVINAAFDLFDKLGANDEQLDFPVVYASGINGWTSLVEGAPG 180
           LKPIVV+NK+D+PGA PD VI+  FDLFD LGA DEQLDFP+VYAS +NG+ +L      
Sbjct: 121 LKPIVVINKIDRPGARPDWVIDQVFDLFDNLGATDEQLDFPIVYASALNGFATLDPDVVS 180

Query: 181 EQWGPDMSALFNTVLKHVPSQKGDPSAPLQLQISALDFSTFVGRIGVGRVSAGVVKPGMD 240
           E    DM+ LF T+++ V S   D   P Q+QIS LD++++VG IGVGR++ G +K    
Sbjct: 181 E----DMTPLFQTIVEKVSSPDADADGPFQMQISQLDYNSYVGVIGVGRINRGSIKTNQQ 236

Query: 241 VAVMEGADGKTIKGRVNQVLTFQGLDRVQVTEAGPGDIVLINGIADIGIGVTITDPLNPA 300
           V+V+ GADGK   G++ QVL + GL+R +V  A  GDIV I G+ ++ I  T+    N  
Sbjct: 237 VSVI-GADGKVRNGKMGQVLGYMGLERTEVDVANAGDIVAITGLGELKISDTVCAAGNVE 295

Query: 301 PLPMLKIDEPTLTMNFCVNTSPLAGREGKYVTSRQVWDRLQKELQSNVALRVKETSEDGI 360
            +P L +DEPTLTM F VNTSP AG+EGKYVTSR + +RLQ+EL  NVALRV+ET     
Sbjct: 296 AMPPLSVDEPTLTMTFQVNTSPFAGKEGKYVTSRNILERLQQELVHNVALRVEETDSPDR 355

Query: 361 FEVMGRGELHLTILLENMRREGYELAVSKPRVVFREINGERHEPIEMVTADIEEQHQGGV 420
           F V GRGELHL+IL+ENMRREGYELAVS+P V+ + I+GE  EP E +T D+EE+HQG V
Sbjct: 356 FAVSGRGELHLSILIENMRREGYELAVSRPEVILKTIDGELCEPFETLTVDVEEEHQGTV 415

Query: 421 MQALGERKGELVNMEPDGRGRVRLEYRIPARGLIGFTNEFLNLTRGSGLIANIFDGYEPH 480
           ++ LG RK E+ +M+ DG+GRVR+++ IP+RGLIGF  EFL  T G+GLI + FD Y PH
Sbjct: 416 IEKLGIRKAEMKDMQLDGKGRVRVDFVIPSRGLIGFQTEFLTATSGTGLIYHSFDHYGPH 475

Query: 481 K-GDIASRKNGVLISMDDGEIFTYALGKLDDRGRMFVRAGDPVYEGMIVGIHNRDNDLVV 539
           K GDI  R NGVLIS   G+  T+AL  L DRGR+F+     VYEG +VGIH R NDL V
Sbjct: 476 KGGDIGQRANGVLISNATGKALTFALFGLQDRGRLFIGHAAEVYEGQVVGIHARSNDLTV 535

Query: 540 NATRTKQLTNFRVSGKEDAIKITPPIECTLEYGVEFIEDDELVEITPKSIRLRKRHLKEH 599
           N  + KQLTN R SG ++A  +T PI  TLE  +EFI+DDELVE+TPKSIR+RK+HL E+
Sbjct: 536 NCLKGKQLTNMRASGTDEAQVLTTPITLTLEQALEFIDDDELVEVTPKSIRVRKKHLTEN 595

Query: 600 DRKRASR 606
           DRKRASR
Sbjct: 596 DRKRASR 602