Pairwise Alignments

Query, 518 a.a., Inner membrane component of tripartite multidrug resistance system from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 519 a.a., drug resistance transporter, EmrB/QacA subfamily (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  149 bits (377), Expect = 2e-40
 Identities = 115/443 (25%), Positives = 194/443 (43%), Gaps = 25/443 (5%)

Query: 25  VGILIAAMMAGLNNRVGALALADVRGALGFGLDDASWLTTVYSAGEVIAMPFAAWFAITL 84
           + +++  ++  L+  V  +AL  ++G+L  G ++ +W+ T Y     I +P + W A  +
Sbjct: 15  LAVMVPTLIEILDTSVANVALKHIQGSLAAGEEEVTWVLTSYLVANAIVIPMSGWLARLM 74

Query: 85  SVRRFELWMIGACTLLAVCIPFIHDLDLLLAMRFLQGIASGTMIPVLMMAALKFLPPHIR 144
             +RF +  I   T  ++       L  ++  R  QG+  G + P+     ++  PP  R
Sbjct: 75  GRKRFLMLSIAVFTASSLLCGAATSLAQIILFRIFQGLGGGGLQPMSQAILMETFPPQQR 134

Query: 145 LHGLALYALTATFAPNLSIWLAGQWTDGLFDWRWVYWQILPLAAIAALLIGWGLPKDPI- 203
              + ++ +     P L   L G  TD  F WRW+++  LP+  +A  L G  L   P  
Sbjct: 135 GMAMGIFGVGVVLGPILGPLLGGYLTDN-FTWRWIFYINLPVGLLALYLAGAFLFDPPYM 193

Query: 204 -QTDRFPQANWPGMAFGMPAFALITVALDQGVRLDWFNSPLIVVSLVAGLTLLAAYLLTE 262
            +  R    ++ G+A        + + LD+G + DWF+SP I V  V     L   +  E
Sbjct: 194 ERRQRGEVVDYLGLALLTTGIGALQIVLDKGQQDDWFSSPFITVLAVVSAVSLVGLVFWE 253

Query: 263 WYHPAPFIKLQMLSRRNLALG-FTLFICLLVVLTSGVMLPMTYLGPLQSYRP----LQMA 317
             HP P +  ++L  R+ A+G   +F        S V+LP+ +L  L  Y      L + 
Sbjct: 254 LRHPRPVLDFRILKNRSFAIGNVVMFFGFFAFFGSIVLLPL-FLQGLMGYTAYLAGLVLG 312

Query: 318 PIGLIVALPQLVLGSVVALFLYRKWVDARFVFAGGLLLIA--LACFFGAQLTSDWNRDQF 375
           P G++  +   V G +       + +DAR++ A G+L+ A  L    G  L  D+    F
Sbjct: 313 PGGMLALVFMPVAGKLT------ERIDARWMLAFGMLVCAYSLHIMAGFNLYIDFGTAAF 366

Query: 376 VMTQTLQAFGQPMAVVSMLFLCTSVVHPSEGPYVSGNINTLRALGSVLGGAVVGQLVTVR 435
              + LQ    P   VS+  +  + V        S   N LR LG   G A V  L+  R
Sbjct: 367 --ARVLQGIAMPFFFVSLSVVTFAYVPREAMNTASPLYNLLRNLGGSFGVAFVTTLLARR 424

Query: 436 QRFHAEMLLDHAALVGNSVPLAP 458
            ++H      H+ L  +  PL+P
Sbjct: 425 TQYH------HSVLAEDMTPLSP 441