Pairwise Alignments

Query, 531 a.a., Sensory box histidine kinase from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 681 a.a., PAS/PAC sensor signal transduction histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  110 bits (276), Expect = 1e-28
 Identities = 85/270 (31%), Positives = 130/270 (48%), Gaps = 19/270 (7%)

Query: 252 EGLSCIT-RDMTAAKDLDRVMNDLNAELDRRVTQRVRQYTVPNKDLDIFTHHITHDLRGP 310
           EGL  ++ RD+T  K+ +  +     EL R            N +L+ F +  +HDL+ P
Sbjct: 401 EGLVYLSGRDVTQRKEAELHLERQAEELRRS-----------NAELEQFAYIASHDLQEP 449

Query: 311 MRHINTFAGLIAEALGEDASDEIRHFRDAMKRASQRLNAMIENLLTYSRIGRIDLHPGQL 370
           +R I +F  L+A+        +   F      A++R+  MIE+LL YSR+          
Sbjct: 450 LRKIASFLDLLAKRYVGRLDSDADEFIGFAVDAARRMKDMIEDLLAYSRVSTQGREFEDT 509

Query: 371 EMKSVLEGVVSRLRQSEPHRDIQWVIQDDLPAVVADAAMVADLFTRLLDNAMKFTRPCEQ 430
           +M+ V++ V+S L           V +  LP + AD   +  L   LL NA+K+ R    
Sbjct: 510 DMEKVVDTVLSDLGLLFEEAGAT-VERGPLPMIRADRVQMEQLLRNLLGNAVKY-RSEAP 567

Query: 431 AEIQIGC-RAESDG----SCLFFIVDNGVGFDVAKAHNLFLMFQRQHHSLDFEGYGAGLA 485
             I IG  RA  DG    + +F + DNG+G        +F +FQR H    + G G GLA
Sbjct: 568 PSISIGAERATGDGHPGKAWVFHVRDNGIGMKPEHFERIFRVFQRLHGPGRYPGTGIGLA 627

Query: 486 LCQRIVQRHNGRIWLDSTPGHGCAVYFTLP 515
           +C++IV+RH G I ++S PG G    F +P
Sbjct: 628 VCKKIVERHGGTIDVESVPGRGSTFRFVMP 657



 Score = 32.3 bits (72), Expect = 6e-05
 Identities = 31/125 (24%), Positives = 48/125 (38%), Gaps = 28/125 (22%)

Query: 38  NQAFCDSQGLRPSELEGRPFQDCFAQDALPALLPRFMQAVGGEKQVLVSEQHIPGSHAVR 97
           N A+    G  P E+ G PF D    D + A  P  +  + G          + G  A  
Sbjct: 327 NPAWVRLFGFLPEEVTGHPFLDFVHPDDMDASRPLLVGGMNG----------LAGVVATP 376

Query: 98  LETAFVPDFRDGVVHG-------------VFLEARDITEHRHDPALEEHVNRRTHELRQA 144
           +E  F    +DGV                V+L  RD+T+ +     E H+ R+  ELR++
Sbjct: 377 VENRF--RCKDGVYRWLAWASVVLPEEGLVYLSGRDVTQRKE---AELHLERQAEELRRS 431

Query: 145 KRRFD 149
               +
Sbjct: 432 NAELE 436