Pairwise Alignments

Query, 1053 a.a., Probable transmembrane drug efflux protein from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 1049 a.a., efflux protein from Sinorhizobium meliloti 1021

 Score =  916 bits (2368), Expect = 0.0
 Identities = 477/1028 (46%), Positives = 680/1028 (66%), Gaps = 22/1028 (2%)

Query: 20   FNLSQWALDHQAFTRYLMIVLMVLGVVGYFQLGQDEDPPFTFRAMVVRAYWPGATAEQVA 79
            FNLS+WA+ H +  R+L+ ++++ G +G  ++GQ EDP FTFR MVV+A WPGA+ +++ 
Sbjct: 11   FNLSRWAIGHPSIARFLLALIIITGGLGLLRMGQREDPEFTFRVMVVQAVWPGASIQEME 70

Query: 80   EQVADRIEKTLQEVPYADKIRSYSKPGETLIIFQLKDSSPPQEVQQIWYTARKKVGDMRG 139
            +QV ++IE+ LQE P+ D +RSY++ G  +I  Q++  +   EV   +Y  RKKVGD+  
Sbjct: 71   DQVVNKIERKLQETPHLDFVRSYTRAGSAIITVQIEGDTNADEVADAFYQVRKKVGDIAN 130

Query: 140  TLPQGVVGPFFNDEFGDVYGVIYALQGEGFSPADKKQVADDVRQRLLRVKDVRKVELFGV 199
             LP+GV+GP+FNDEFGD +  ++++ G+GFS  + K+ A + R  LL    V KV + G 
Sbjct: 131  ELPEGVLGPYFNDEFGDTFITLHSISGDGFSYPELKRFAIEGRDMLLATPGVEKVVVLGD 190

Query: 200  QDEKLYIEISQKRLATLGLNLQQVLDALGQQNAVESAGSVQTPQDVVQVRVAGAFNSVEQ 259
            Q EK+YI++S K LA  GL    + +A+  QN V+ AGSV T    V++ V G    VE 
Sbjct: 191  QPEKIYIDLSSKVLAERGLTFNDLRNAIAGQNNVDYAGSVDTGTRSVRISVEGDVTKVED 250

Query: 260  LRAMPIRAANGTQIRLGDIAKIGLGYVDPPQVLVRHEGKDSIALGISMAKGGDIIALGKA 319
            +R + +RA + T IRLGDIA +  G  DP     R  G DS+ +G+ MAKG ++  +GKA
Sbjct: 251  IRELRLRAGDRT-IRLGDIATVTSGLEDPYARKFRFNGHDSVQIGVVMAKGFNVTDVGKA 309

Query: 320  LKTTVAGIEATLPAGMTLAQVQDQPSAVTNSVNEFVKVLIEAVVIVLAVSFLALGLHRRP 379
            ++ T    E+ LP G+++ QV +QP  VT ++ EF   LIEA++IVL VSFL++G     
Sbjct: 310  VEATYDRFESALPYGVSVDQVSNQPEVVTEAITEFSHALIEALIIVLIVSFLSIG----- 364

Query: 380  GGRGLKRYVLDMRPGLVVFITIPLVLAITFLAMHYWGIGLHKISLGSLIIALGLLVDDAI 439
                        R GLV+ I IPLVLA TF  M+  GI L +ISLG+LIIALGLLVDDA+
Sbjct: 365  -----------WRSGLVIAIAIPLVLAATFAIMYELGIDLQRISLGALIIALGLLVDDAM 413

Query: 440  IAVEMMVRKLEEGYDMMRAATFTWDATAMPMLTGTLITAAGFLPIGLANSTTGEYTFAIF 499
            I VEMM RKLEEG + + AA+F + +TA PMLTGTLIT AGF+P+G A ST GEY  ++F
Sbjct: 414  IVVEMMERKLEEGLEKIDAASFAYSSTAFPMLTGTLITTAGFIPVGFAESTAGEYVRSLF 473

Query: 500  AVTVLALVISWVVAVLFVPYLGVVLLKVKPHAEGEPHEVFDGPFYVRFRAVVDWCVQHRW 559
             V  +ALV+SW VAV F P+LG ++LK + HA G  H+VFD  FY R R  V W V+HR 
Sbjct: 474  YVVGIALVVSWFVAVYFTPWLGYMILKQRHHA-GTHHDVFDTRFYRRLRTTVGWAVRHRV 532

Query: 560  LTIGATILTFVLGIAGMGSVQQQFFPDSSRPEILVDIWLPEGSSMPAMDEVTRRVENRLA 619
            + +  T+  FV  +     + + FFP SSRPEILVD+WLPEG+S+  +++  + +E R+ 
Sbjct: 533  VVLLMTLAIFVTSLWAFQFIPKNFFPQSSRPEILVDLWLPEGTSIKEVEKQAKALEERMM 592

Query: 620  KEEGVRGVTTWVGSGVPRFYLPLDQIFPQTNVSQMIVLPQDLKTREHLRKALPGLLATEF 679
             +E  R + T++G G PRF+LPLDQ     N +Q++V+ +D   RE L   L  +LA +F
Sbjct: 593  DDEDKRFIATYIGEGAPRFFLPLDQQLRNPNFAQLLVMAKDEPARERLIAKLRTILAEDF 652

Query: 680  PEVRGRVKLLPNGPPVPYPVQFRVVGSDPQVLRGLADEVKLAMRENPNMRGVNDNWNESV 739
            P +R +V  L  GPP  +PVQ RV+G D + +R +AD+VK   +ENP +  ++D+W E V
Sbjct: 653  PSIRAKVDRLFLGPPTGWPVQMRVMGPDREEVRRIADQVKTKFQENPMLGAIHDDWLEPV 712

Query: 740  KRLRLEVDQAKARALGVSSQSIAQASRTLLSGTTVGQYREGDKLIDIVLRQPLEERDAIT 799
              ++L +DQ +ARALG++SQ I Q  +  +SG  +  +R+G++ + I+ R+P   R  ++
Sbjct: 713  PAMKLVIDQDRARALGITSQRIRQMLQAAMSGVPLDSFRDGEETVSIMAREPGGNRHLLS 772

Query: 800  SLANAYLPTASGQAIPLLQIARPVFDWEPGVLWRENRDYAITVQGDVVEGLQGATVTAQL 859
            ++ + Y+PT  G  +P+ QIA+ V   E G+ WR +R   ITV+G + +G+Q   V  QL
Sbjct: 773  AVQSVYVPTDFGGFVPVSQIAKVVPVMEQGIEWRRDRLPTITVRGTLPDGVQPNDVAMQL 832

Query: 860  QPKLKAISDGWASKGLGAYHIEVAGAVEESSKGSASIVVGVPLMLFIVFTLLMLQLQSFS 919
              +LK + DG A      Y +E+ G  E+S++  ASI    P+ML ++  LLM+QLQ F 
Sbjct: 833  FDELKGLRDGLAP----GYKVEIQGGAEDSAESQASIAAKAPIMLVVIVILLMVQLQHFG 888

Query: 920  RSMLVFLTGPLGMAGVAGALLLLNRPFGFVALLGVIALMGMIQRNSVILIDQIEQDRARG 979
            ++MLV  TGPLG+ G A ALL+   PFGFVA+LGVIAL+G+I RNS+IL+DQI+QD A G
Sbjct: 889  KAMLVLATGPLGIIGAAAALLISGAPFGFVAILGVIALLGIIIRNSIILVDQIDQDIAAG 948

Query: 980  VPAWDAIVEAAVRRMRPIVLTAAAAVLAMIPLSRSVFWGPMAVAIMGGLIVATVLTLLAL 1039
            +   +AI+ AAVRR RPI+LTA  AVLA+IP+SR VFWGP+A A+MGG++VATVLT+L L
Sbjct: 949  MERSEAIIGAAVRRFRPIILTALTAVLALIPISRGVFWGPLAYAMMGGILVATVLTILVL 1008

Query: 1040 PAMYAAWF 1047
            PA YA +F
Sbjct: 1009 PAGYALFF 1016