Pairwise Alignments

Query, 498 a.a., 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 450 a.a., 23S rRNA methyltransferase from Pseudomonas fluorescens FW300-N2E3

 Score =  267 bits (683), Expect = 5e-76
 Identities = 173/459 (37%), Positives = 249/459 (54%), Gaps = 51/459 (11%)

Query: 33  LAVESLDIDAQGIARRPDGKVVFIEGALPFEQVSVNV---HRKKNNWEAGTVTAIHRESS 89
           L++E L  D +GIA   +G+  F+ GAL  E+V   V   H K    EA T         
Sbjct: 29  LSIERLANDGRGIAFF-EGRTWFVIGALAGEEVEARVLGAHGKVV--EARTERVFVANQL 85

Query: 90  QRVRPGCPHFGLHAGACGGCKMQHLHEAAQVAVKQRVLEDNLWHLGKVRAETLMRPIEGP 149
           +R  P       HAG CGGC +QHL  + Q+A+KQR+L + L  +  V  E    P+ GP
Sbjct: 86  RRPAPCA-----HAGRCGGCSVQHLPHSEQLALKQRMLAEQLSRVAGVEPEQWAEPLSGP 140

Query: 150 AWGYRHRARLSVRHVHKKGEVLIGFHERKSRYVADMQVCPVLPPHVSAMLMPLRELIFGM 209
            + YR RAR++VR   K  ++ +GF    S+ +  +  CPVL   +  ++  L E++  +
Sbjct: 141 EFAYRRRARVAVRWNVKTKKLEVGFRAAGSQDIVGINDCPVLVQPLQPIMSGLPEMLRRL 200

Query: 210 DARETCPQIELASGDDVTALVLRHLEPLSEDDLARLRAFGARHGVQWWLQAKG-PDTVKL 268
              +    +EL +G  + AL+LRH+ PLSE+DL+ L+ F A H  Q WL  +G P  V  
Sbjct: 201 SKPQALGHVELFAGSSL-ALLLRHMAPLSENDLSILKEFCAFHDAQLWLHGEGEPQPV-- 257

Query: 269 LDEGGEVLSYALPEFGITMPFKPTDFTQVNPFINRVLVVRALRLLDARADERVIDWFCGL 328
             +  + L Y L ++ + + ++P DF QVN  +N  +V +AL  L   ADERV+D FCGL
Sbjct: 258 --DADQALGYRLEQWDLELAYRPGDFIQVNAGVNEAMVAQALEWLKPAADERVLDLFCGL 315

Query: 329 GNFTLPIATTAGEVLGIEGSEALVARSRENLAGN--------QAGRDRPLAPTTFAARNL 380
           GNF LP+A    EV+ +EG +A+V R+  N A N        QA   +PLA   +A+   
Sbjct: 316 GNFALPLAQKVREVVAVEGVQAMVERAAANAASNNLHNAKFFQADLSQPLADAKWASEGF 375

Query: 381 FEMTPELLVADGVAQKWLVDPPREGAFALAKAIADLHQNPALRGGWTPPQRIVYVSCNPA 440
             +              L+DPPR+GAF + + +A L             +R+VYVSCNPA
Sbjct: 376 SAV--------------LLDPPRDGAFEVVRTLASL-----------GAKRLVYVSCNPA 410

Query: 441 TLARDAGLLVHQAGYRCVTAGVVNMFAHTAHVESMAVFE 479
           TLARD   L+ Q GYR   AG+++MF  TAHVE+MA+FE
Sbjct: 411 TLARDTVELIKQ-GYRLKRAGILDMFPQTAHVEAMALFE 448