Pairwise Alignments

Query, 498 a.a., 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 431 a.a., 23S rRNA (uracil-5-)-methyltransferase RumA from Dechlorosoma suillum PS

 Score =  453 bits (1165), Expect = e-132
 Identities = 239/446 (53%), Positives = 300/446 (67%), Gaps = 23/446 (5%)

Query: 35  VESLDIDAQGIARRPDGKVVFIEGALPFEQVSVNVHRKKNNWEAGTVTAIHRESSQRVRP 94
           +ESLD DA+G+ R  +GK VF+EGALP E V   + R+K N+  G V+A+ R S  RV P
Sbjct: 6   IESLDHDARGVTRL-EGKTVFVEGALPGETVEYALFREKPNYAVGEVSAVLRPSCARVPP 64

Query: 95  GCPHFGLHAGACGGCKMQHLHEAAQVAVKQRVLEDNLWHLGKVRAETLMRPIEGPAWGYR 154
            CPHFG     CGGC MQHL   AQVA KQR+LE+NLWHL +++ E +  PI GP WGYR
Sbjct: 65  RCPHFG----TCGGCSMQHLEPTAQVAAKQRLLENNLWHLARLKPEQVYNPIYGPTWGYR 120

Query: 155 HRARLSVRHVHKKGEVLIGFHERKSRYVADMQVCPVLPPHVSAMLMPLRELIFGMDARET 214
           HRARL+VR V  KG +L+GFHE++S YVAD+  CP+LP HVS +L+PLR+L   +  R+ 
Sbjct: 121 HRARLTVRMVESKG-MLVGFHEKRSSYVADLHTCPILPAHVSDLLVPLRQLFVRLSIRDR 179

Query: 215 CPQIELASGDDVTALVLRHLEPLSEDDLARLRAFGARHGVQWWLQAKGPDTV-KLLDEGG 273
            PQ+E+A G+  T +VLR LEPLS  D   LRAF   HG+ ++LQ KGP +  +     G
Sbjct: 180 LPQVEIAVGEKCTVMVLRILEPLSGADEKLLRAFADEHGIVFFLQPKGPASAYRFHPVDG 239

Query: 274 EVLSYALPEFGITMPFKPTDFTQVNPFINRVLVVRALRLLDARADERVIDWFCGLGNFTL 333
             LSY LPEFG+ M F PT+FTQVNP IN++L+ RA+RLLD +  ER+ D FCGLGNFTL
Sbjct: 240 PDLSYLLPEFGLEMRFSPTEFTQVNPGINQMLIRRAMRLLDPQPGERIADLFCGLGNFTL 299

Query: 334 PIATTAGEVLGIEGSEALVARSRENLAGNQAGRDRPLAPTTFAARNLFEMTPELLVADGV 393
           PIA +   V+G+EG + L  R+ EN A N        A  +F   NLFE TP+ L A G 
Sbjct: 300 PIARSGARVVGVEGLKELTRRAEENAAANGLA-----ANVSFGVANLFECTPKSLGALGH 354

Query: 394 AQKWLVDPPREGAFALAKAIADLHQNPALRGGWTPPQRIVYVSCNPATLARDAGLLVHQA 453
             K L+DPPREGA  + KA+           G   P RIVYVSCNP+TLARDA +LVHQ 
Sbjct: 355 FDKMLIDPPREGAVEVVKAL-----------GEDSPGRIVYVSCNPSTLARDAAILVHQK 403

Query: 454 GYRCVTAGVVNMFAHTAHVESMAVFE 479
           GYR   AG+VNMF HT+HVES+A+FE
Sbjct: 404 GYRFSGAGIVNMFPHTSHVESIALFE 429