Pairwise Alignments

Query, 496 a.a., RND efflux system, outer membrane lipoprotein CmeC from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 474 a.a., efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family from Pseudomonas stutzeri RCH2

 Score =  416 bits (1070), Expect = e-121
 Identities = 243/479 (50%), Positives = 307/479 (64%), Gaps = 30/479 (6%)

Query: 24  LTLLAAAALSACSFIPKYERPEAPVASQFPGPQ--PAAAADAKTGADVAWREFIGDAKLR 81
           L L  AAAL  CS IP+Y+RP+APVA  +P  +  P  AA A   A + WREF  D  L+
Sbjct: 6   LALALAAALGGCSLIPEYQRPDAPVAGDWPQGEAYPQGAAQASERA-LGWREFFRDPALQ 64

Query: 82  ELIALALKNNRDLRVATLNIEQVRAQYQIRRADQFPTIGLAATGNRQPD-------GNGG 134
           +LI +AL+NNRDLRVA LN++  RA Y+++RAD  P +    +G R          G   
Sbjct: 65  QLIEVALENNRDLRVAALNVDAYRALYRVQRADVLPAVSADGSGTRSRTPGDMNMTGEPA 124

Query: 135 IQSTYSVGLALSTWEIDFFGRLGALKEAALAQYLASEEARHAAQTSLVAAVASTWLSLQA 194
           I S YS    +S WE+D FGRL +L++ AL +Y ASE A+ + Q SL+A+VA+ WL+LQA
Sbjct: 125 ISSQYSATFGVS-WELDLFGRLRSLRDQALEEYFASEAAQRSTQISLIASVANAWLTLQA 183

Query: 195 NDELLVLTERTVATREDSLRLSKLRFDNGATSALDLRQAESLTAAAQSALAQQRRLRALD 254
           +  LL +T  T+ T E+SL L++  FD G  SAL+LRQA S   +A+ ++ Q  RL A D
Sbjct: 184 DQALLQVTRDTLKTYEESLGLTQRSFDVGVASALELRQARSAVDSARVSIEQYTRLVAQD 243

Query: 255 INALTLLVGQAPPAELLPVPPTLPAPSANANQVVVPTAPVPAATMLREVPAGLPSDLLTR 314
            NALTLL+GQ+ PA L                   P+      T L  +P GLPSDLL +
Sbjct: 244 RNALTLLLGQSLPAGL-------------------PSGDGLERTQLAALPIGLPSDLLQQ 284

Query: 315 RPDIRQAEQQLIAANANIGAARAAFFPRISLTASAGTASSSLSGLFKDGSWGFTLAPQAL 374
           RPDI QAE QL A NA+IGAARAAFFPRISLT +AGTASS LSGLF  GS  ++ +P   
Sbjct: 285 RPDILQAEYQLRAVNASIGAARAAFFPRISLTGAAGTASSELSGLFDGGSGYWSFSPSIS 344

Query: 375 LPIFDAGRNRANLDSSNAGRDIAVAQYEKAIQTAFREVADALAGSATLGDQLSAQQLQAT 434
           +PIF+AG+ RANLD +   ++I VAQYEKAIQTAFREVAD LA  AT   Q+ AQ+    
Sbjct: 345 VPIFNAGQLRANLDYAQISKNIQVAQYEKAIQTAFREVADGLAAQATYTRQVQAQRDLLQ 404

Query: 435 AEAERFRLAELRYRNGVASFLDVLDAQRSLFATQQALAQTRLAQQQNQVNLYKALGGGW 493
              + + LAE RYR GV S+L VLDAQR LF  QQ L   RLAQ  ++VNL+KALGGGW
Sbjct: 405 TSEDYYNLAERRYRTGVDSYLTVLDAQRQLFNVQQQLIGDRLAQMTSEVNLFKALGGGW 463