Pairwise Alignments

Query, 496 a.a., RND efflux system, outer membrane lipoprotein CmeC from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 499 a.a., RND efflux system, outer membrane lipoprotein, NodT (NCBI) from Rhodospirillum rubrum S1H

 Score =  388 bits (997), Expect = e-112
 Identities = 227/472 (48%), Positives = 290/472 (61%), Gaps = 26/472 (5%)

Query: 30  AALSACSFIPKYERPEAPVASQFP-GPQ-PAAAADAKTGADVAWREFIGDAKLRELIALA 87
           A L  CSFIP Y+RP APV + +P GP    A A  +T A + WREF  D  L+ LIA A
Sbjct: 25  ALLGGCSFIPDYQRPAAPVPTAWPDGPAYDQAQAGGETIATLGWREFFRDPALQRLIAQA 84

Query: 88  LKNNRDLRVATLNIEQVRAQYQIRRADQFPTI--GLAATGNRQP-----DGNGGIQSTYS 140
           L++NRDLR A L +E  RA Y+I RAD  PT+  G   T  R P      G     + YS
Sbjct: 85  LEHNRDLRSAALTVESARATYRIERADLLPTVNGGTDLTHQRTPRTATQTGKAQTTTNYS 144

Query: 141 VGLALSTWEIDFFGRLGALKEAALAQYLASEEARHAAQTSLVAAVASTWLSLQANDELLV 200
             +  +++EIDFFGR+ +L+E AL QY A+EEAR + Q +L+A VA+ +++L A+  LL 
Sbjct: 145 ANIGTTSYEIDFFGRIRSLEEEALEQYFATEEARRSVQIALIAEVANAYITLLADRTLLQ 204

Query: 201 LTERTVATREDSLRLSKLRFDNGATSALDLRQAESLTAAAQSALAQQRRLRALDINALTL 260
           LTE T+ TR +S  L++  FD G  + LD+ QA++    A++  A   R  A DINAL L
Sbjct: 205 LTEETLNTRIESFNLTQQSFDRGVGTRLDVTQAQTTVETARANRAIYTRYVAQDINALRL 264

Query: 261 LVGQAPPAELLPVPPTLPAPSANANQVVVPTAPVPAATMLREVPAGLPSDLLTRRPDIRQ 320
           LVG    A LL   P                 P+        VPAGLPSDLL RRPDI +
Sbjct: 265 LVGDQLDANLLAGTP-----------------PLDLGRFFPNVPAGLPSDLLLRRPDILE 307

Query: 321 AEQQLIAANANIGAARAAFFPRISLTASAGTASSSLSGLFKDGSWGFTLAPQALLPIFDA 380
           AE +L+AANANIGAARAAF+P+ISLT + GTAS+SL  LF  GS  +++ P   +P+FD 
Sbjct: 308 AEHKLVAANANIGAARAAFWPKISLTGNLGTASASLGDLFSSGSLAWSVGPSLSVPLFDF 367

Query: 381 GRNRANLDSSNAGRDIAVAQYEKAIQTAFREVADALAGSATLGDQLSAQQLQATAEAERF 440
            RN A L+S+   R+IAVA YEK+IQTAFREVADALA   TLGDQL AQQ    A  E +
Sbjct: 368 WRNEATLESAKVQREIAVAAYEKSIQTAFREVADALAAKGTLGDQLRAQQDLVAATQESY 427

Query: 441 RLAELRYRNGVASFLDVLDAQRSLFATQQALAQTRLAQQQNQVNLYKALGGG 492
            L+  RY  G+ ++L  LD+QRSL+A QQ L   R  Q  N + LYK LGGG
Sbjct: 428 ALSRNRYDQGIDNYLSTLDSQRSLYAAQQDLISVRANQLTNYITLYKVLGGG 479