Pairwise Alignments

Query, 333 a.a., ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 336 a.a., hypothetical protein (NCBI) from Rhodospirillum rubrum S1H

 Score = 53.9 bits (128), Expect = 6e-12
 Identities = 67/253 (26%), Positives = 106/253 (41%), Gaps = 25/253 (9%)

Query: 11  RRACLSLLAAAALASPLAAHAQLQEITYLLPAPGTLPAFGPWMLAQAKGYYEQEGLKVNF 70
           R   + L  AA  A P +A   L ++T  L    T   F  + +A+AKG+Y+ EGL V  
Sbjct: 5   RSLAVGLTLAALGAGPASA---LDKLTLQLKWV-TQAQFAGYYVAEAKGFYKDEGLDVTI 60

Query: 71  VTARGGVDVAKQIGAGNAVIGGAIGDTPIIARAQGIPVKAVAVLGAGSLTQLVSHKDEKI 130
            +    ++ ++ I  G A +      + +  R +G+P+  +A +   S   L   KD  I
Sbjct: 61  RSGGPDINPSQVIAGGGADVVLDWMPSALATREKGVPLVNIAQIFQKSGMMLTCRKDAGI 120

Query: 131 ESPRELKGKTVTVLAYTDTTYYALLGMLSKVGLTKN----DVNIQAAG-PAGVWQQFAAK 185
             P + KG+T+ V  +     +     +SK+G + +    DV I   G       Q  A 
Sbjct: 121 TKPEDFKGRTLGV--WYGGNEHPFFAWMSKLGYSTSGAHPDVTILKQGFNVDPILQNQAP 178

Query: 186 KASAMAGVPDWTVSAMEAGAQVDILPADIYFKSMAQA---------ILASDETIAKNPQL 236
             S       W V  ++ G  VD L   + FK   Q          +LA D         
Sbjct: 179 CISTTTYNEYWQV--VDGGIPVDDL---LNFKYEDQGVATLEDGFWVLAKDLEDPAKVDK 233

Query: 237 IQKLVRATLKGMK 249
           + +LVRAT+KG +
Sbjct: 234 LARLVRATMKGWR 246