Pairwise Alignments

Query, 333 a.a., ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 335 a.a., putative sulfonate/nitrate transport system substrate-binding protein (NCBI) from Rhodospirillum rubrum S1H

 Score = 66.2 bits (160), Expect = 1e-15
 Identities = 84/327 (25%), Positives = 137/327 (41%), Gaps = 57/327 (17%)

Query: 23  LASPLAAHAQLQEITYLLPAPGTL---------PAFGPWMLAQAKGYYEQEGLKVNFVTA 73
           LA P+AA A+ ++     PAP  +         P  GP ++AQ  GY++  GL+V+ V  
Sbjct: 29  LAGPIAA-ARAED----KPAPAKVSVLLDWFINPDHGPLIVAQDLGYFKDAGLEVDLVAP 83

Query: 74  RGGVDVAKQIGAGNAVIGGAIGDTP--IIARAQGIPVKAVAVLGAGSLTQLVSHKDEKIE 131
               D  K + AG A I  A+G  P  ++  A+G+P+     L A  L  LV  KD  I+
Sbjct: 84  ADPNDPPKLVAAGKADI--AVGYQPQLVMQVAEGLPLMRFGTLVATPLNCLVVLKDGPIK 141

Query: 132 SPRELKGKTV--TVLAYTDTTYYALLG-MLSKVGLTKNDVNI--------------QAAG 174
           S  +LKG+ V  +V  + D    ALLG ML   G+  ++V +              Q   
Sbjct: 142 SVADLKGRKVGFSVGGFED----ALLGAMLDNAGVKADEVTLVNVNFSLSPAVISGQVDA 197

Query: 175 PAGVWQQFAAKKASAMAGVPDWTVSAMEAGAQVDILPADIYFKSMAQAILASDETIAKNP 234
             G ++ F   +   +AG P       E G  +             + +  ++  +  +P
Sbjct: 198 VIGPFRNFELNQMD-LAGHPGTAFYPEEHGVPL-----------YDELVFVTNIALKGDP 245

Query: 235 QLIQKLVRATLKGMKDIMADPKAATTAYVAHVPVHKGKEASIQKAFELFNKYVYAAQKVP 294
           +L+   + A  +G   I+  P+ A T + AH P     +   +     +   V      P
Sbjct: 246 RLV-AFLDAVERGTHYIVNHPEEAWTLFKAHSP-----DLDDELNHRAWIDTVARFSMTP 299

Query: 295 GTMDEARLAELQKFYVTNGVVPKETPV 321
           G +DE R A    F  + G++    P+
Sbjct: 300 GALDERRYARFAGFLQSRGLIKTVPPL 326