Pairwise Alignments

Query, 333 a.a., ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 807 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score = 75.9 bits (185), Expect = 3e-18
 Identities = 79/318 (24%), Positives = 133/318 (41%), Gaps = 15/318 (4%)

Query: 11  RRACLSLLAAAALASPLAAHAQLQEITYLLPAPGTLPAFGPWMLAQAKGYYEQEGLKVNF 70
           RR    LLAA  L     A   L+ +T  L        F  + +AQA+GYY + GL+V  
Sbjct: 8   RRLLGHLLAALYLLLAAGAAGALESVTLQLKWQHQFQ-FAGYYMAQARGYYREAGLEVRI 66

Query: 71  VTARGGVDVAKQIGAGNAVIGGAIGDTPIIARAQGIPVKAVAVLGAGSLTQLVSHKDEKI 130
           V  R   D   ++ AG A  G    +  ++ R++G PV A+A +   S   L++     I
Sbjct: 67  VEGRADTDPVAEVLAGRAQYGIGASEL-LLERSRGKPVVALAAVFQHSPLVLLARAGGPI 125

Query: 131 ESPRELKGKTVTVLAYTDTTYYALL--GMLSKVGLTKNDVNIQAAGPAGVWQQFAAKKAS 188
             P +L+G+ + +L  T+   +A L    + +  L +   +  AA          A +  
Sbjct: 126 RRPADLEGRRLMLLP-TEAELFAFLRREQVKEERLQRVPHSFSAA-------DLMAGRVD 177

Query: 189 AMAG-VPDWTVSAMEAG-AQVDILPADIYFKSMAQAILASDETIAKNPQLIQKLVRATLK 246
           A++G + D T    +AG   +   P           +  ++     +PQ ++   RA+L+
Sbjct: 178 AVSGYLTDETYELEKAGFPYLSFSPRAANIDFYGDTLFTAEAHAVAHPQQVEAFRRASLQ 237

Query: 247 GMKDIMADPKAATTAYVAHVPVHKGKEASIQKAFELFNKYVYAAQKVPGTMDEARLAELQ 306
           G    +ADP AA    + H       E  + +A E     +       G M  AR   + 
Sbjct: 238 GWAAALADPDAAAREILQHYSTRHSLEHLLFEA-ERMRPLIEPTLVELGHMSPARWRRIG 296

Query: 307 KFYVTNGVVPKETPVKEL 324
             Y   G++P++  V+ L
Sbjct: 297 DTYAELGMMPRDYAVETL 314