Pairwise Alignments

Query, 333 a.a., ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 355 a.a., nitrate ABC transporter permease from Burkholderia phytofirmans PsJN

 Score = 63.2 bits (152), Expect = 1e-14
 Identities = 84/343 (24%), Positives = 131/343 (38%), Gaps = 27/343 (7%)

Query: 10  TRRACLSLLAAAALASPLAAHAQLQEITYLLPAPGT----------LP--AFGPWMLAQA 57
           TRR  LS  A AA       HA  Q  T   PA             LP  + G  +LA A
Sbjct: 17  TRRTALSAAALAAATLFTGVHAAAQ--TTDKPAARVADKVRVNLAWLPQGSTGGILLAHA 74

Query: 58  KGYYEQEGLKVNFVTARGGVDVAKQIGAGNAVIGGAIGDTPIIARAQG---IPVKAVAVL 114
           KGYY + GL V+ +   GG     ++  G    G     + ++ RA G   + V A+   
Sbjct: 75  KGYYREAGLDVSVMRGYGGQRTVNEVDGGLFEFGYGDPVSVMLNRAHGGHAVMVGAINTR 134

Query: 115 GAGSLTQLVSHKDEKIESPRELKGKTVTVLAYTDTTYYALLGMLSKVGLTKNDVNIQAAG 174
             G++  L      K+ S ++L G T+            +   L + G+  + +      
Sbjct: 135 WPGAMCYL-ERPGFKVSSLKDLAGMTLGG-GGASPVQNIMPAWLKQNGMAPDAIKTVRLD 192

Query: 175 PAGVWQQFAAKKASAM-----AGVPDWTVSAMEAGAQV-DILPADIYFKSMAQAILASDE 228
           PA +      K+         A +P        AG Q+  +   D     M   I+ +D 
Sbjct: 193 PAVINTALLQKRIDLSECWEGASLPVQAALVKRAGQQLGKVYYRDFGLDMMGNGIVTTDS 252

Query: 229 TIAKNPQLIQKLVRATLKGMKDIMADPKAATTAYVAHVPVHKGKEASIQKAFELFNKYV- 287
            +A++P ++++ V AT +G   +   P+ A  A  A  PV   K   +Q+  E       
Sbjct: 253 FVAQHPDVVKRFVAATYRGYALMREHPQEAADAIAAQYPV-LDKTILLQQIVETNGLITD 311

Query: 288 YAAQKVPGTMDEARLAELQKFYVTNGVVPKETPVKELYTNQFV 330
             AQ   G +  AR+     F         +    +LYTN+FV
Sbjct: 312 DPAQHKTGWLRPARMDATAAFVSQAFGTGAKVKAADLYTNRFV 354