Pairwise Alignments

Query, 437 a.a., Nitrate ABC transporter, nitrate-binding protein from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 430 a.a., nitrate binding protein nrtA from Caulobacter crescentus NA1000

 Score =  266 bits (679), Expect = 1e-75
 Identities = 166/429 (38%), Positives = 231/429 (53%), Gaps = 18/429 (4%)

Query: 20  TPTPAESPAASRREFIKKGSAIGTAALFSTLGHHGVWAAGSDAPEKTEVKIGFIPLTDCA 79
           T T   +   +RR  +   +A   AA  +  G  G  AAG+  PE  + ++GFI LTD +
Sbjct: 4   TKTDKPTSGLTRRSALMGAAATLAAAKAAFPG--GAHAAGA-GPEVAKARLGFIALTDSS 60

Query: 80  SVVMAAELGIDKKYGVK-IVPTKEASWAGVRDKLV----NNELDMAHVLYGLIYGLQLGT 134
            +++A E G+  KYG+  I   K+ASWA  RD LV       +D AH+L  + Y +  GT
Sbjct: 61  PLIIAKERGLFAKYGMPDIEVVKQASWAATRDNLVLGAERGGIDGAHILTPMPYLMTTGT 120

Query: 135 --AGPKKDMAILMNLNQNGQAITLSKKL--AEKGAVDGPSLAKL--MATEKREYTFAQTF 188
              G    M IL  LN NGQ I++   L   + G     + AK   M         A TF
Sbjct: 121 ITGGAPTPMYILARLNTNGQGISVGNDLKSVKVGLNSAGAKAKFLQMKAAGNIAKVAMTF 180

Query: 189 PTGTHAMWLYYWLAAAGIDPFKDARAIVVPPPQMVANMRVGNMDGFCVGEPWNHRAIMDG 248
             GTH +W+ YWLAA GI+P  D   IV+PPPQMVANM+ G  D FCVGEPWN + +   
Sbjct: 181 RGGTHDLWIRYWLAAGGINPDVDVSTIVIPPPQMVANMKAGTQDAFCVGEPWNGQLVNQK 240

Query: 249 IGITANTTQDIWKDHPEKVLGTTAEFVQKNPNTARAVTAAILEAGKWIDAGLQNKNKMAE 308
           +G TA  T ++W +HPEK LG  A +V + P  A+A+TAA+ EA  W D    N  +M  
Sbjct: 241 VGYTACLTSELWMNHPEKALGMRASWVDRYPRAAQAITAAVQEAQMWCDKA-ANLPQMCS 299

Query: 309 TIAQRSYVNTGVDAINQRILGRYQNGLGKTW-DDPNHMKFYNDGAANYPYLSDGMWFLTQ 367
            ++ R YVN  +  I  R+ G    G G+T  + P+ MKF+ D  A++P+ S  +WFLT+
Sbjct: 300 IVSGRQYVNVPMGDILPRLQGTVDYGDGRTLKNSPHRMKFWADN-ASFPFKSHDLWFLTE 358

Query: 368 HKRWGLLKSHPDYLAVAKQVNRIDIYKEAASATKTPLPKSDLRSA-KFIDGVVWDGKDPA 426
             RWG+L    +  A+  +VNR DI++ AA +     P  D R   +F DG V+D  +P 
Sbjct: 359 DIRWGVLPQKTNTKALVDKVNRSDIWRAAAKSIGQSGPAGDSRGVERFFDGKVFDPANPG 418

Query: 427 KYADSFKMK 435
            Y  S  +K
Sbjct: 419 AYLASQPIK 427