Pairwise Alignments

Query, 183 a.a., hypothetical protein from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 183 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  110 bits (275), Expect = 1e-29
 Identities = 62/177 (35%), Positives = 97/177 (54%), Gaps = 3/177 (1%)

Query: 6   DTVLAATRHWIEKAVIGLNLCPFARAVYVKNQVRIVVSTARHLDAFLDDLDRELDLLVNT 65
           D +   T +W++K ++  N+CPFAR    +  +R +V     +   L  L  E   L   
Sbjct: 5   DLITQQTDNWVKKVIMKYNICPFARREVERGSIRYLVVEQTKVKQVLKALIEECQYLDTH 64

Query: 66  PAEEIDTTLLVHPTLFPDFEVFNDFLNVVDDVVAEHELEGVIQVAPFHPLFQFEGTAPDD 125
           P  E  T+L + P  F  F  + D +++ +D + +++ EGV Q+A FHP + FEG   D 
Sbjct: 65  PEHE--TSLFILPRGFEGFYAYLDLVDMANDELFDNDYEGVYQLAHFHPDYCFEGEPQDS 122

Query: 126 VTNATNRAPFPILHLLREDSVERAIETTGGDADAIVERNLQTLRELGSDGWRALMAE 182
             N TNRAP+P LH++RE S+E A+  +  D ++I ERN+      GSD +  L+AE
Sbjct: 123 AANFTNRAPYPTLHVIREASMELAL-ASYTDPESIPERNIAFCERKGSDFFVKLLAE 178