Pairwise Alignments

Query, 456 a.a., Conjugative transfer protein TrbL from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 430 a.a., P-type conjugative transfer protein TrbL from Sphingomonas koreensis DSMZ 15582

 Score =  394 bits (1011), Expect = e-114
 Identities = 223/458 (48%), Positives = 294/458 (64%), Gaps = 31/458 (6%)

Query: 1   MDDVAVIDRFLNTFSTYIDSGFGLLNGEVAFLTATLVAIDMTLAGLFWAMGHATGQGEDV 60
           MDD+ VID+F+  F  YIDSGFGLL G+V FLT  L+ ID+TLAGLFWA+G      +D+
Sbjct: 1   MDDLNVIDQFMEAFIRYIDSGFGLLGGDVGFLTTILIGIDITLAGLFWALGGE----DDI 56

Query: 61  LARMLRKVLYVGAFAYIIGNFHSLSGIVFRSFAGLGLQASGSGMSLATFLQPGHLAKAGI 120
           L + L+K+LYVG FA I+ +F +LS I+FRSFAGLGL A GS +S    L PG LA  G 
Sbjct: 57  LGKFLKKILYVGVFALILNSFSTLSDIIFRSFAGLGLTAGGSAISAQDLLMPGRLAGTGF 116

Query: 121 DAAAPILQQISDLSGFPEVFINIAPIVVLFLAWLTVIVSFFVLAVQLFVTLIEFKLTTLA 180
           +AA P+L+Q  +L G    F N   I VL +AW+ VIV+FF+LA+QLF+T++EFKLT+LA
Sbjct: 117 EAAWPLLEQARELVGPIGFFDNFIEIAVLVIAWVVVIVAFFILAIQLFITILEFKLTSLA 176

Query: 181 GFVLVPFALWNKTTFLAEKVLGNVVSSGIKVLVLAVIVGIGTGLFSQFQTVPA--EPSID 238
           GFVLVPFALWN+T+FLAE+VLGNV+SSGIKV+VLAVIVGIG+  F+ F +     + SI+
Sbjct: 177 GFVLVPFALWNRTSFLAERVLGNVISSGIKVMVLAVIVGIGSNYFADFTSAITGDDVSIE 236

Query: 239 HALVVMLASLSLLGLGIFGPGIATGLVSGAPQLGAGAAAGTALGATGLAVAGGA-AVAGV 297
            A+ +MLASL++ GL IFGPGIA+GLV+GAPQLGAG+   T    T LAVAGGA AVAG 
Sbjct: 237 QAVSLMLASLAIFGLAIFGPGIASGLVAGAPQLGAGSVVAT----TALAVAGGAGAVAG- 291

Query: 298 GAAVAAGARMAPGAARAAIGGGASAARSASGLAAGARSAYEAGAAASSGGPLRAAGAGMA 357
                         AR  +G G  A R+ + + A   +AY+ G   +SG    AAG G  
Sbjct: 292 --------------ARGLVGAGMGAIRAGTSMGAATSTAYKLG-QETSGSSTIAAGLGGV 336

Query: 358 NVARTGAGAVGHKLADGAKAVKDKVSGFVTEAAAPAAASSAESAMSSSNTSAPANEPAWA 417
             A  GA A   K A G  A  +K       A +P AASS +++ ++    A    PAWA
Sbjct: 337 ATAAKGAAANRIKSASGLGAAAEKGRQAAWAAGSPPAASSGQASAAAGADGA----PAWA 392

Query: 418 QRMRRRQQIGHAAATAAHTLRGGDGGGSGSGPSLRDSD 455
           +++   Q        A H ++ GD  G+ + P +++ D
Sbjct: 393 RQLHASQTARQRRQMAVHAIQSGDRSGASATPDIKEKD 430