Pairwise Alignments

Query, 261 a.a., 5-aminopentanamidase (EC 3.5.1.30) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 282 a.a., hydrolase, carbon-nitrogen family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 77.8 bits (190), Expect = 2e-19
 Identities = 70/243 (28%), Positives = 111/243 (45%), Gaps = 23/243 (9%)

Query: 5   LTLALWQCPYASSPSQALVLLDATA---AQARAQGAG----LLLCPEMSLTGYQIGAAGV 57
           + ++L QC  +   S  L+ +++      Q R Q       L++ PE SL      +  +
Sbjct: 1   MRISLLQCQSSRDVSANLLFIESQLEELTQERQQWGDNSPHLVVLPECSLLFGGHESQQL 60

Query: 58  AALAEPADGALAQAVAAIAQRHGIAIVYG-YPEQRADGKPWNAVQFVDADGQRLANYRKT 116
           A   +     L  A++A+A R+ + +V G  P     G+ ++     D  G  L +Y K 
Sbjct: 61  AYAGDSHHSQLKSALSALATRYRVFMVAGTIPALAEGGRVYSRCYLFDDKGDTLGHYDKL 120

Query: 117 HLFGDVDRAQ----------FSPGPQAPAVFAWRGWQLGLLICYDIEFPEPARGLALQGV 166
           HLF DVD A           F PG     +    G ++GL ICYD+ FP+  R + L G 
Sbjct: 121 HLF-DVDVADGTKQYRESETFCPGDHISVIDTPFG-KIGLSICYDLRFPDLFRAMRLAGA 178

Query: 167 DAVLVPTA-NMIAFDEVQRVLLPARALENRVFVAYANACG--QEGDTTYGGLSTVCGPDG 223
           + + VP+A   +  +   +VLL ARA+E + F+  A   G   +G     G S V GP G
Sbjct: 179 EIITVPSAFTKVTGEAHWQVLLQARAIETQCFIVAAAQWGAHNQGSRETWGQSMVIGPWG 238

Query: 224 AVM 226
            ++
Sbjct: 239 NII 241