Pairwise Alignments

Query, 275 a.a., Alkanesulfonates transport system permease protein from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 277 a.a., ABC transporter permease from Rhodopseudomonas palustris CGA009

 Score =  117 bits (292), Expect = 4e-31
 Identities = 72/248 (29%), Positives = 115/248 (46%), Gaps = 11/248 (4%)

Query: 20  LVALVVFWYLMTTPGLVPPFMFENDRQAAFFFGEPLRVAERIWTWFVRDADIYQHLGVTL 79
           L A    W  +T   LV  F+  +          P+ +AE +W     D  ++ HLG +L
Sbjct: 37  LTAFFAIWQAITQLNLVDGFLLPS----------PVAIAEALWE-LALDGSLWVHLGASL 85

Query: 80  TETVLAFAIGAIGGLAGGLWLALSPMASAILEPYIKAMNSMPRIILAPIFAVWFGLGIAS 139
               + F +  + GL  GL        S  + P I+A+  +P +   PI  +WFGLG A+
Sbjct: 86  QRVAVGFLLACVVGLTLGLICGWWRTVSDYVRPVIEALRPIPPLAWIPITILWFGLGDAA 145

Query: 140 KVALGVTLVFFIVFFNVYQGVKEVSPVILANARMLGASQRQLLRHVYLPSATSWVFSSLH 199
              L      F VF   Y  ++ +    +  A  LGA   QL   V +P++   +   L 
Sbjct: 146 SYFLVFLGAVFPVFIATYTAIRGLDRNQMNAALCLGAKPWQLFTDVLIPASLPIILPGLR 205

Query: 200 TSVGLAFVGAVVGEYLGSSQGVGYLILQAEGSFDINTVMAGIVVLTAFALALDAAVGRIE 259
            ++G+ ++  V  E + +  G+GYLI Q+   F IN V+AG+V +     A+ A + RIE
Sbjct: 206 IALGVGWMCVVTAELIAAQTGLGYLIQQSRMLFQINNVVAGMVTIGLIGFAMSAILERIE 265

Query: 260 KRLMKWQP 267
           +R+  W P
Sbjct: 266 RRVNAWAP 273