Pairwise Alignments

Query, 288 a.a., ATP synthase F0 sector subunit a from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 264 a.a., ATP synthase F0, A subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  221 bits (564), Expect = 1e-62
 Identities = 129/290 (44%), Positives = 179/290 (61%), Gaps = 28/290 (9%)

Query: 1   MAAEG-TLTPGEYIRHHLVHLTNHKQGSIVDFSVINIDSVVVSALLGLLTVFVLWRAARV 59
           MAA G  LTP  YI+HHL   TN   G    F   +IDS+  S  LG+L +++     + 
Sbjct: 1   MAAPGEALTPQGYIQHHL---TNLHVGE--GFWTWHIDSLFFSVGLGVLFLWIFRSVGKK 55

Query: 60  ATAGVPGRFQAAVEMLVEMVDSQAKSVIHNAQSRKLVAPLALTVFVWIFMMNFMDMIPVD 119
           AT+GVPG+ Q  +EM+VE VD+  K   H   +  L+APLALT+F+W+FMMNFMDMIPVD
Sbjct: 56  ATSGVPGKLQCFIEMIVEFVDNSVKESFHGRNA--LIAPLALTIFMWVFMMNFMDMIPVD 113

Query: 120 LIPQIWHSAGPAMGFKDYLRVVPTADLSTTLGLSVSVLLMCLFYNIKIKGLGGWAHELVS 179
            +P +   AG       YL+VVPT D++ T  L++ V ++ ++Y+IK+KG+ G+  EL  
Sbjct: 114 WLPWLASLAG-----IPYLKVVPTTDVNITFSLAIGVFVLIIYYSIKVKGVSGFVKELTL 168

Query: 180 APFGTSKNPLWAVLLGIVNFLMQMIEFVAKTVSHGMRLFGNMFAGELVFMLIALL-GAYA 238
            PF           +  VN L++ +  +AK +S  +RLFGN++AGEL+F+LIAL+ G   
Sbjct: 169 QPFNHK-------AMIPVNLLLETVTLIAKPISLALRLFGNLYAGELIFILIALMYGTNL 221

Query: 239 TLSLGGGLFFIGHLIAGTVWTLFHILVITLQAFIFMMLALIYLGQAHDAH 288
            LS  G    +G       W +FHILVITLQAFIFMML ++YL  AH+ H
Sbjct: 222 LLSSLGVTLQLG-------WLIFHILVITLQAFIFMMLTIVYLSMAHEDH 264