Pairwise Alignments

Query, 303 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 308 a.a., Protein of unknown function DUF6, transmembrane (NCBI) from Rhodospirillum rubrum S1H

 Score = 92.0 bits (227), Expect = 2e-23
 Identities = 80/296 (27%), Positives = 124/296 (41%), Gaps = 18/296 (6%)

Query: 11  LLVLLTIVWGINWPIMKFGVT-GMPPLTFRTICIWLGLPVLAAFLWWRKVPFRVP-REHW 68
           LL+L   +W  N  + K      +PP+        L    L  F W   V  R   R HW
Sbjct: 17  LLILPQFLWATNAIVGKIAAQHAIPPVALAFWRWVLAFAFLLPFAWSALVADRAKLRAHW 76

Query: 69  VELFWLTVFNMLFWHTLAILAIQTLSSGRAAILGYTMPVFSALVGSWWFGQRLSGRAWGG 128
             +  L   +   ++ L   A+ T ++    ++   MPV  AL+   W G+RL+GR   G
Sbjct: 77  PMVLVLGALSAGAYNALMYAALATSTAINVTLVASAMPVVMALLARVWLGERLNGRQGLG 136

Query: 129 VAAAALGVALLLWH-EFTQLSGKPL--GVVMMLVAAATWAVGTQMMRRTRIPLPTLTL-- 183
           +  +ALGV +++   + T L    L  G ++ML+A A+W+V + ++RR  + L  ++L  
Sbjct: 137 IVISALGVVVVVARGDITVLLSLALNRGDLLMLLAMASWSVYSVLLRRHPLGLKPVSLLA 196

Query: 184 -----SFWVTALTAVWMTAMALVLERDAWVAPSPGIWWAILYNALGVFAFAQVAWLSLAR 238
                   V      W  A   VL  D   A      W + Y A+    FA   W     
Sbjct: 197 GQIGAGVLVLVPIYAWERAGGAVLPLDLTTA------WVLPYTAIFPAIFAFYFWNRGVA 250

Query: 239 DLPPIASTLSVMFIPVLGVFTGAWWLGEVLHWQDWAAVALVMVAIGSVLWPPRSAA 294
            + P  + +    +P+L      W LGE   W   A +AL++  I  V   PR  A
Sbjct: 251 AVGPSIAGVYTNLMPILTALLAVWLLGEEFAWYHMAGLALILGGIAFVTGLPRRRA 306



 Score = 34.3 bits (77), Expect = 4e-06
 Identities = 31/144 (21%), Positives = 60/144 (41%), Gaps = 12/144 (8%)

Query: 3   ALSRQQLVLLVLLTIVWGINWPIMKFGVTGMPPLTFRTICIWLGLPVLAAFLWWRKVPFR 62
           AL+R  L++L+ +   W +   +++    G+ P++     I  G+ VL     W +    
Sbjct: 160 ALNRGDLLMLLAM-ASWSVYSVLLRRHPLGLKPVSLLAGQIGAGVLVLVPIYAWERAGGA 218

Query: 63  V-PRE---HWV---ELFWLTVFNMLFWHTLAILAIQTLSSGRAAILGYTMPVFSALVGSW 115
           V P +    WV      +  +F   FW+      +  +    A +    MP+ +AL+  W
Sbjct: 219 VLPLDLTTAWVLPYTAIFPAIFAFYFWNR----GVAAVGPSIAGVYTNLMPILTALLAVW 274

Query: 116 WFGQRLSGRAWGGVAAAALGVALL 139
             G+  +     G+A    G+A +
Sbjct: 275 LLGEEFAWYHMAGLALILGGIAFV 298