Pairwise Alignments

Query, 303 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 320 a.a., Protein of unknown function DUF6, transmembrane (NCBI) from Rhodospirillum rubrum S1H

 Score = 91.3 bits (225), Expect = 3e-23
 Identities = 83/299 (27%), Positives = 130/299 (43%), Gaps = 5/299 (1%)

Query: 7   QQLVLLVLLTIVWGINWPIMKFGVTGMPPLTFRTICIWLGLPVLAAFLWWRKVPFRVPRE 66
           ++L LL++L  +WG ++  +K GV  +PPLT   +   +   +LAA +  R +     R 
Sbjct: 9   KELALLLMLATLWGASYTFIKIGVETIPPLTLIALRTLIAGTLLAAIIGGRGLRLPNDRG 68

Query: 67  HWVELFWLTVFNMLFWHTLAILAIQTLSSGRAAILGYTMPVFSALVGSW-WFGQRLSGRA 125
            W         N     TL   A QT  +G AAIL  T PVF+ L+ +     + +SGR 
Sbjct: 69  TWARFLVQACLNSAIPFTLIAWAEQTTDAGLAAILNATTPVFAFLMTALITRHEAVSGRK 128

Query: 126 WGGVAAAALGVALLLWHEFTQLSGKPLGVVMMLVAAATWAVGTQMMRRTRIPLPTLTLSF 185
             GV A   G+ L++  +     G+ L   + +VAA        +  +T   L  +  + 
Sbjct: 129 LLGVIAGLAGIGLIVGVQALGGLGRELWAQLAIVAATLCYAAAAIFGKTFKGLDPMMPAA 188

Query: 186 WVTALTAVWMTAMALVLERDAWVAPSPGIWWAILYNALGVF--AFAQVAWLSLARDLPPI 243
                 A  +  ++LV++    +APS     A+L  AL VF  A A   +  L + L  I
Sbjct: 189 GSLICGAALLVPLSLVVDHPWTLAPSGRSLLALL--ALSVFSTALAFALYFRLIQTLGSI 246

Query: 244 ASTLSVMFIPVLGVFTGAWWLGEVLHWQDWAAVALVMVAIGSVLWPPRSAAARVAAPRG 302
            +T        +GV  G   LGE L    W  +  V+  + ++  P R  A   A  RG
Sbjct: 247 GTTAQAYLRVPIGVAIGVVVLGEDLSATAWLGLGCVVAGVIAMTLPGRKPAEGAAIRRG 305