Pairwise Alignments

Query, 254 a.a., Pca regulon regulatory protein PcaR from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 280 a.a., beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family from Pseudomonas stutzeri RCH2

 Score =  151 bits (381), Expect = 2e-41
 Identities = 89/242 (36%), Positives = 138/242 (57%), Gaps = 3/242 (1%)

Query: 3   ALYQGMAVLRVFDGEHSGLTLTEIAHKLGWSRTKPYRYVYTLEQMGYLVRQEGTKRYRPT 62
           +L +G+AV+  F      LT+ +I+H+    R    R ++TL ++GY+     T    P 
Sbjct: 36  SLARGLAVIHAFQERKRHLTIAQISHRTEIPRAAVRRCLHTLMKLGYVTTDGRTYSLLPK 95

Query: 63  SLTMTLGYSYLSGLSLLELAQPILDRLKNALGASVHMGILEQGEVVYIA-SARVSVVPAV 121
            LT  LG++YLS   L   AQPILDRL   L  +  M  LE  EV+Y+A SA    + +V
Sbjct: 96  VLT--LGHAYLSSTPLAVTAQPILDRLSEQLHEACSMAALEGDEVLYVARSATPQRLISV 153

Query: 122 NIHVGSRVPPYVTSLGRALLSEMGDDQVDALIGKADLPASTPRSITKPAAFRQMLKTSRE 181
           ++ VGSR+P Y TS+GR LL+ + D  +D  + +ADL   T R++  P A R  +   R 
Sbjct: 154 DLSVGSRLPAYCTSMGRILLAALDDAALDDYLARADLQIKTSRTLHTPEALRSSIDDIRR 213

Query: 182 QGYVFTDEEFHPGVRSIAAPVHDRKGEVVAAINATSIVQKFSDAYLAEQVVPLVVGAAEE 241
           QG+V  D+E   G+RS+A P+ D  G+V+AA+N  +   + S   L  + +P+++ A+ E
Sbjct: 214 QGWVIIDQELEVGLRSLAVPLKDSAGQVLAALNVGTHAGRVSRQELETRFLPVLLEASRE 273

Query: 242 IS 243
           +S
Sbjct: 274 LS 275