Pairwise Alignments

Query, 297 a.a., Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 290 a.a., succinyl-CoA synthase, alpha subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  318 bits (816), Expect = 7e-92
 Identities = 161/296 (54%), Positives = 209/296 (70%), Gaps = 9/296 (3%)

Query: 1   MSIYINKDTKVITQGITGKTGQFHTEKCQEYANGKNAFVAGVNPKKAGESIFNIPIYASV 60
           MS+ INKDTKVI QG TG  G FH+++  +Y       V GV+P K G     +P++ +V
Sbjct: 1   MSVLINKDTKVICQGFTGGQGTFHSQQAIDYGT---QMVGGVSPGKGGSEHLGLPVFNTV 57

Query: 61  KEAATQTGATVSVIYVPPAGAAAAIWEAVEADLDLAICITEGIPVRDMLEVRNKMKAKEA 120
           K+A   TGAT SVIYVP      AI EA++  ++L +CITEGIP  DML+V+ K+   E 
Sbjct: 58  KDAVAATGATASVIYVPAPFCKDAILEAIDGGIELIVCITEGIPTLDMLQVKVKL---EE 114

Query: 121 AGGKKTLLLGPNCPGLITPDEIKIGIMPGHIHRKGRIGVVSRSGTLTYEAVAMLTEVGLG 180
            G +   ++GPNCPG+ITP E KIGIMPGHIH KG++G+VSRSGTLTYEAV   T+ G G
Sbjct: 115 TGVR---MIGPNCPGVITPGECKIGIMPGHIHLKGKVGIVSRSGTLTYEAVKQTTDEGFG 171

Query: 181 QSTAVGIGGDPINGLKHIDVMKAFNDDPDTDAVIMIGEIGGPDEADAARWCKANMKKPVV 240
           QST VGIGGDPI G   IDV++ F +DP T+A++MIGEIGG  E +AA + KA++ KPVV
Sbjct: 172 QSTCVGIGGDPIPGTNFIDVLEMFQNDPQTEAIVMIGEIGGTAEEEAAAYIKAHVTKPVV 231

Query: 241 GFIAGVTAPPGKRMGHAGALISGGADTADAKLAVMEESGFIITRNPSELGKLLKAQ 296
            +IAGVTAP GKRMGHAGA+I+GG  TA  K A +E +G    R+ +++GK L+A+
Sbjct: 232 SYIAGVTAPAGKRMGHAGAIIAGGKGTAADKFAALEAAGVTTVRSLADIGKALRAK 287