Pairwise Alignments

Query, 980 a.a., DNA topoisomerase III, Burkholderia type (EC 5.99.1.2) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 651 a.a., DNA topoisomerase III from Klebsiella michiganensis M5al

 Score =  274 bits (701), Expect = 1e-77
 Identities = 194/640 (30%), Positives = 317/640 (49%), Gaps = 43/640 (6%)

Query: 4   LVIAEKPSVAQDIVRALTPVAGKFDKHDDHFENDKYVVTSAVGHLVEIAAPEQFDVKRGK 63
           L IAEKPS+ + I   L     K D + +    +  VVT  +GHL+E A P+ +D +  +
Sbjct: 3   LFIAEKPSLGRAIAEVLPKPHRKGDGYIEC--GNGQVVTWCIGHLLEQAQPDVYDARYAR 60

Query: 64  WSFAHLPVLPPYFELKPIDKTKSRLGAVVKLVKRKDVTRLINACDAGREGELIFRLIEQY 123
           W+   LP++P  ++L+P      +L  + +L+   D   +I+A D  REG+L+   +  Y
Sbjct: 61  WNLLDLPIVPEKWQLQPKPSVTKQLNVIKRLLG--DAQEVIHAGDPDREGQLLVDEVLDY 118

Query: 124 AGGLKNGSYQSLGKPVQRLWLQSMTPAAIRDGFEQLRSDEQMRGLADAARSRSEADWMVG 183
                    Q     VQR  +  + P A+     +LR++ +   L  +A +R+ ADW+ G
Sbjct: 119 LQLAPEKRQQ-----VQRCLINDLNPQAVERAINRLRANSEFVPLCVSALARARADWLYG 173

Query: 184 INGTRAMTAFNSRDGGFFLTTVGRVQTPTLSIVVEREEKIRAHRSRDYWEIHASFLAEAG 243
           IN TRA T      G   + +VGRVQTP L +VV R+E+I    ++D++++ A  +    
Sbjct: 174 INMTRAYTILGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVAKDFFDVKAHIVTPKD 233

Query: 244 E-YPGKWFDPNFKKPTGDDADAELRADRVWSQREALAIAEAVRGKAASVKE-ESKPTTQA 301
           E +   W      +P  D+        R+  +  A  + + + G+ A+V     K  ++ 
Sbjct: 234 ERFVATWVPSEACEPYQDE------EGRLLHRSLAEHVVKRIEGQPATVTAYNDKRDSEP 287

Query: 302 SGLLYDLTSLQREANGRFGFSAKTTLQLAQSLYERHKALTYPRTDSRALPEDYLPTVKQT 361
           + L + L++LQ EA  RFGFSA+  L + Q LYE HK +TYPR+DSR LPE++       
Sbjct: 288 APLPFSLSALQIEAAKRFGFSAQNVLDICQKLYETHKLITYPRSDSRYLPEEH------- 340

Query: 362 FDMLAG--SGMKHLAPHAKTAIDNGYIRPS--KRIFDNSKVSDHFAIIPTLQAPS-GLSE 416
               AG  + +  ++ HA   +    + P    R +D+ KV  H AIIPT ++    LS+
Sbjct: 341 ---FAGRHAVLNAISVHAADLLPQPVVDPEIRNRCWDDKKVDAHHAIIPTARSSQVKLSD 397

Query: 417 AEQKLYDLVVRRFLAVFFPSAEFMVTTRITSSVGHHFKTEGKVLVKPGWMAVYGKEAAED 476
            E+K+Y L+ R++L  F P A F             F  + + L + GW  + G +    
Sbjct: 398 NEEKVYGLIARQYLMQFCPDAVFRKCQIDLDIANGKFVAKARFLAEAGWRTLLGNK---- 453

Query: 477 VVDAKEGDKGQNLVPVREGETVRTETVEPKGLKTKPPARYSEATLLGAMEGAGKLVDDDE 536
             +  E + G  L  V + + +  E  E    +T+PP  +++ATLL AM G  + V D +
Sbjct: 454 --ERDEENDGMPLPVVAKDDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQDKD 511

Query: 537 LREAMQ-EKGLGTPATRAAIIEGLLTEKYILREGREIIPTAKAFQLMTLLRGLGVEELSK 595
           L++ ++   GLGT ATRA IIE L    ++ ++GR I  T     L   L     E  ++
Sbjct: 512 LKKILRATDGLGTEATRAGIIELLFKRGFLTKKGRYIHSTDAGKALFHSL----PEMATR 567

Query: 596 PELTGEWEYKLAQMEHGQLSRAAFMGEIAAMTERMVKKAK 635
           P++T  WE  L Q+   Q     FM  +     +++ +A+
Sbjct: 568 PDMTAHWESILTQISEKQCRYQDFMQPLVGTLFQLIDQAR 607