Pairwise Alignments

Query, 980 a.a., DNA topoisomerase III, Burkholderia type (EC 5.99.1.2) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 898 a.a., DNA topoisomerase III from Castellaniella sp019104865 MT123

 Score = 1036 bits (2680), Expect = 0.0
 Identities = 558/924 (60%), Positives = 672/924 (72%), Gaps = 52/924 (5%)

Query: 2   KTLVIAEKPSVAQDIVRALTPVAGKFDKHDDHFENDKYVVTSAVGHLVEIAAPEQFDVKR 61
           KTL+IAEKPSVA DI RAL    G F +  D+FE++++V++S+VGHL+ + AP   D  R
Sbjct: 3   KTLIIAEKPSVALDISRAL----GGFTREGDYFESEQFVLSSSVGHLLGLVAPN--DPVR 56

Query: 62  GKWSFAHLPVLPPYFELKPIDKTKS-RLGAVVKLVKRKDVTRLINACDAGREGELIFRLI 120
           GKWSFAHLPV+PP FEL P DK  + RL  +VKL+KRKDV  +INACDAGREGELIFR I
Sbjct: 57  GKWSFAHLPVIPPQFELSPADKRSTERLKLLVKLLKRKDVGAIINACDAGREGELIFRYI 116

Query: 121 EQYAGGLKNGSYQSLGKPVQRLWLQSMTPAAIRDGFEQLRSDEQMRGLADAARSRSEADW 180
            QY+G         + KP+QRLWL+SMT AAIR+ F  LR DE M+ L  AARSR+EADW
Sbjct: 117 VQYSG---------VKKPIQRLWLRSMTQAAIREAFANLRDDETMKPLEAAARSRAEADW 167

Query: 181 MVGINGTRAMTAFNSRDGGFFLTTVGRVQTPTLSIVVEREEKIRAHRSRDYWEIHASFLA 240
           +VGINGTRAMTAFNS+DGGFF T VGRVQTPTL+IV+ERE++IR   +RDYWE+HA+F+A
Sbjct: 168 LVGINGTRAMTAFNSKDGGFFKTPVGRVQTPTLAIVMEREDRIRQFITRDYWEVHATFVA 227

Query: 241 EAGEYPGKWFDPNFKKPTGDDADAELRADRVWSQREALAIAEAVRGKAASVKEESKPTTQ 300
            AG Y G+WFDP FKK   ++ D + R  R+WS   A  I  A R +  +V EESKP+TQ
Sbjct: 228 AAGLYEGRWFDPAFKK---NEQDPDARDSRLWSASAAQTIVAACREQPGTVTEESKPSTQ 284

Query: 301 ASGLLYDLTSLQREANGRFGFSAKTTLQLAQSLYERHKALTYPRTDSRALPEDYLPTVKQ 360
            S  L+DLT+LQREAN RFGFSAKTTL LAQ+LYERHKALTYPRTDSR LP+DY+ TV+Q
Sbjct: 285 MSPALFDLTTLQREANSRFGFSAKTTLSLAQTLYERHKALTYPRTDSRYLPQDYVSTVQQ 344

Query: 361 TFDMLAGSGM---KHLAPHAKTAIDNGYIRPSKRIFDNSKVSDHFAIIPTLQAPSGLSEA 417
           T   L+ S     + + P A   +   +++P++RIFD+ KVSDHFAIIPTLQ P  LS+A
Sbjct: 345 TMQGLSDSESGVARSVRPFAAQVVAQDWVKPNRRIFDDKKVSDHFAIIPTLQVPRELSDA 404

Query: 418 EQKLYDLVVRRFLAVFFPSAEFMVTTRITSSVGHHFKTEGKVLVKPGWMAVYGKEAAEDV 477
           E K+Y+LV RRFL+VFFP+AEF +TTRIT   GHHFKT+GKVLV PGW+A+YG+EA  D 
Sbjct: 405 EFKIYELVTRRFLSVFFPAAEFRITTRITQVSGHHFKTDGKVLVSPGWLAIYGREAQGD- 463

Query: 478 VDAKEGDKGQNLVPVREGETVRTETVEPKGLKTKPPARYSEATLLGAMEGAGKLVDDDEL 537
            DA       +L+ V EGE VRTE +E + L TKPPAR++EATLL AMEGAGKLVDD+ L
Sbjct: 464 -DA-------SLIAVAEGERVRTEDIEARALVTKPPARFNEATLLSAMEGAGKLVDDEAL 515

Query: 538 REAMQEKGLGTPATRAAIIEGLLTEKYILREGREIIPTAKAFQLMTLLRGLGVEELSKPE 597
           REAM E+GLGTPATRAAIIEGLL E Y+ REGR++IP+AKA QLMTLL GLGV EL+ PE
Sbjct: 516 REAMSERGLGTPATRAAIIEGLLNEGYLRREGRDLIPSAKARQLMTLLAGLGVNELTSPE 575

Query: 598 LTGEWEYKLAQMEHGQLSRAAFMGEIAAMTERMVKKAKEYDRDTIPGNYATLSTPCPNCG 657
           LTGEWE++L  +E  QL R  FM EIA MT+ +VK+AKEY+RDT+PG+YATL TPCP CG
Sbjct: 576 LTGEWEHQLKLIEQRQLDRETFMREIAQMTQVIVKRAKEYERDTVPGDYATLKTPCPKCG 635

Query: 658 GVVKXNYRRYTCTGADGNSEGCGFSFGKSPAGRTFEPEEAEQLLRDKKIGPLEGFRSKAG 717
           GVVK NYRRY CT        C FS GK P GRTFE  E E+LL  + +GPL GF SK G
Sbjct: 636 GVVKENYRRYACT-------VCDFSIGKHPGGRTFEVPEVEELLAKRTLGPLTGFISKMG 688

Query: 718 WPFVAEIVIKFNEEEKNWKLEFDFGDDKKGEESGELVDFTGSESLGACPKCGSPVHEHGS 777
            PF A  V++  +E   +KLEFDFG  +K +E  E VDF+G   LGACPKCG  V EHG 
Sbjct: 689 RPFAA--VLRITDE---FKLEFDFG--QKEDEDAEAVDFSGQTPLGACPKCGGRVFEHGM 741

Query: 778 NYVCEKSVPTLAQPTPSCDFKSGKIILQQPVAREQMSKLLDTGKTDLLDKFVSMRTRRAF 837
           NYVCE SV     P  +CDF+SGK+ILQQ +  EQMS+LL TGKT L D FVS RT R F
Sbjct: 742 NYVCEHSV----GPAKTCDFRSGKVILQQEIPAEQMSQLLATGKTKLFDGFVSSRTNRKF 797

Query: 838 KAFLAWDKEAGKVNFEFEPRASKFPPRKTAAGAP-AKAAPAKKAAPAKKAPAAKKAAAKT 896
           KA+L   ++ GK+ FEFE RA K P  K AAG P AK A   KA  AK +  AK +AAKT
Sbjct: 798 KAYLV-RQDDGKIGFEFEARAPK-PGAKAAAGKPAAKTAATAKAGAAKASSTAKASAAKT 855

Query: 897 PKAPRKTTAATGKQPSAALAAVIG 920
            K+  KT  +T    S+  AA  G
Sbjct: 856 TKSAGKTAKSTRAAASSKSAAKTG 879