Pairwise Alignments

Query, 980 a.a., DNA topoisomerase III, Burkholderia type (EC 5.99.1.2) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 704 a.a., DNA topoisomerase III (RefSeq) from Shewanella sp. ANA-3

 Score =  310 bits (795), Expect = 2e-88
 Identities = 220/650 (33%), Positives = 334/650 (51%), Gaps = 45/650 (6%)

Query: 4   LVIAEKPSVAQDIVRALTPVAGKFDKHDDHFENDKY--VVTSAVGHLVEIAAPEQFDVKR 61
           L IAEKPS+     RA+  V  K  K  D F  D     V+  VGHL+E A P+ ++ + 
Sbjct: 3   LYIAEKPSLG----RAIADVLPKPHKKGDGFIEDAQGNCVSWCVGHLLEQAEPDAYNPEF 58

Query: 62  GKWSFAHLPVLPPYFELKPIDKTKSRLGAVVKLVKRKDVTRLINACDAGREGELIFRLIE 121
             W F HLP++P  ++LKP   T+S+L  + KLVK+ D   L+NA D  REG+L+   + 
Sbjct: 59  KSWKFEHLPIVPEKWQLKPKAATRSQLTVLKKLVKQADT--LVNAGDPDREGQLLVDEVI 116

Query: 122 QYAGGLKNGSYQSLGKPVQRLWLQSMTPAAIRDGFEQLRSDEQMRGLADAARSRSEADWM 181
            Y G   +   Q+     QRL +  + P A++    QLRS+ +   L+ +A +RS ADW+
Sbjct: 117 AYLGVTGDKLQQT-----QRLLISDLNPQAVKRALSQLRSNREFIPLSTSALARSRADWL 171

Query: 182 VGINGTRAMTAFNSRDGGFFLTTVGRVQTPTLSIVVEREEKIRAHRSRDYWEIHASFLAE 241
            G+N TRA T    + G   + +VGRVQTP L ++V R+E+I   +S+ ++E+ A  + +
Sbjct: 172 YGMNMTRAYTIQGKKVGYQGVLSVGRVQTPLLGLIVRRDEEIANFQSKPFYEVLAHLVTD 231

Query: 242 AGE-YPGKWFDPNFKKPTGDDADAELRADRVWSQREALAIAEAVRGKAASVKE-ESKPTT 299
             + +  KW       P  D+        RV ++  A  +   +  K A V +  +K   
Sbjct: 232 KDQTFTAKWQPSEACLPYMDE------EGRVLAKGLAQNVVRRITDKPAKVTQLSTKDKQ 285

Query: 300 QASGLLYDLTSLQREANGRFGFSAKTTLQLAQSLYERHKALTYPRTDSRALPEDYLPTVK 359
           Q   L Y L++LQ +A  RFG SAK  L   QSLYERHK +TYPR+DSR LP +      
Sbjct: 286 QNPPLPYSLSALQIDAAKRFGMSAKDVLDTCQSLYERHKLITYPRSDSRYLPTEQHALAS 345

Query: 360 QTFDMLAGSGMKHLAPHAKTAIDNGYIRPSKRIFDNSKVSDHFAIIPTLQAP--SGLSEA 417
                + G G   L  HA+        R   + +D+ KV  H AIIPT + P  +GLS+ 
Sbjct: 346 GVLAAIMG-GAPELVAHAEAPNP----RLKSKAWDDKKVDAHHAIIPTEKQPNLAGLSQR 400

Query: 418 EQKLYDLVVRRFLAVFFPSAEFMVTTRITSSVGHHFKTEGKVLVKPGWMAVYGKEA---- 473
           E++LY  + R++LA F+P+  +  T    +  G  FKT+ K     GW  ++ +E     
Sbjct: 401 ERQLYLHIARQYLAQFYPAYCYSETAVEVTIEGGLFKTKAKQDKSLGWKQLFAREENERK 460

Query: 474 --------AEDVVDAKEGDKGQNLVPVREGETVRTETVEPKGLKTKPPARYSEATLLGAM 525
                   A+   DA+EG+    L P+  G+ +     E    +T+PP  +++ATLL AM
Sbjct: 461 DASSAASFAQGDKDAEEGEYVGQLPPLTLGQVLHCHQGELVEKQTQPPKAFTDATLLSAM 520

Query: 526 EGAGKLVDDDELREAMQE-KGLGTPATRAAIIEGLLTEKYILREGREIIPTAKAFQLMTL 584
            G  + V D E+R+ ++E  GLGT ATRA IIE L    +I R+G+ I+ T     L+  
Sbjct: 521 TGINRYVTDPEIRKILKETDGLGTEATRAGIIELLFKRGFIQRQGKSIVATEIGKGLINS 580

Query: 585 LRGLGVEELSKPELTGEWEYKLAQMEHGQLSRAAFMGEIAAMTERMVKKA 634
           L        + P++T  WE  L  + H ++S   FM  +      +++ A
Sbjct: 581 L----PISATTPDMTALWEASLNGICHKEISYHGFMQPLLGTLNNLIENA 626