Pairwise Alignments

Query, 488 a.a., Fumarate reductase flavoprotein subunit (EC 1.3.99.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 494 a.a., flavocytochrome c flavin subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 77.4 bits (189), Expect = 1e-18
 Identities = 73/239 (30%), Positives = 108/239 (45%), Gaps = 28/239 (11%)

Query: 5   EETFDVVVVGGGGAGLAAAIEARESG-RSVVLLEKNPQPGGSTAWSIGSVTASGTPHQRR 63
           +ET+++V+VG G AGLAAAIEA + G + VV+LEK    GG++A + G    +GT  Q++
Sbjct: 29  DETYEIVIVGSGFAGLAAAIEAGKLGAKEVVVLEKLGVYGGNSALNAGQACFAGTDIQKK 88

Query: 64  RGIVDS----AADHWADMPGFAGDELAGRDNDALRRVLCDEIPATFQWLLDSGVRFMGPM 119
            GI DS      D      G+A ++L     +    +        +Q   D G  +   +
Sbjct: 89  HGIEDSPDLMVKDQLISGRGYAHEDLLRHSAELGAYI--------YQMTKDCGCVYRDHI 140

Query: 120 PEPPHRQP-RMHNVLPNS-RSFIYHLTRRARRAGVDIRTNTPVTALVRQDNGRVTGV--- 174
                    R H V+  S   FI  + + AR  GV  +T      L+  D+G V G+   
Sbjct: 141 INTGGTSANRSHQVVERSGAGFIRPMLKTARSYGVKTKTRHKFEHLITADDGTVLGIQVR 200

Query: 175 --------DAGPL-RFSARGGVVLAAGDFTNGPAFKARFMGPQEAKVEGVNVT-ATGDG 223
                   D+G L    A  GV++A G F    AF+        ++V   N   ATGDG
Sbjct: 201 KDYHFGHEDSGKLINIKAEKGVLIATGGFAANVAFRQALDPTLGSEVGCTNARGATGDG 259



 Score = 28.5 bits (62), Expect = 6e-04
 Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 423 HSEGGLMVDAQHRVLG-ENDQPLPGLYAAGSTGQG 456
           + +GG+ ++ +  V+  +N +P+P LYAAG    G
Sbjct: 431 YCQGGIQINTKAEVIAAKNGKPIPKLYAAGEVTGG 465