Pairwise Alignments

Query, 488 a.a., Fumarate reductase flavoprotein subunit (EC 1.3.99.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 517 a.a., flavocytochrome c flavin subunit, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  118 bits (295), Expect = 6e-31
 Identities = 148/530 (27%), Positives = 231/530 (43%), Gaps = 107/530 (20%)

Query: 5   EETFDVVVVGGGGAGLAAAIEARESGRSVVLLEKNPQPGGSTAWSIGSVTASGTPHQRRR 64
           +E  DV+VVG G AG++AA++ARESG  V++++K P  GG++  + G++  +G+P Q++ 
Sbjct: 45  DEIVDVLVVGSGFAGMSAALQARESGVKVMVIDKMPVFGGNSTINGGAMAVAGSPLQKQA 104

Query: 65  GIVDSAADHWADMPGFAGDELAGRDNDALRRVLCDEIPATFQWLLDSGVRFMGPMPEPPH 124
           GI DS     ADM   AG    G ++  + +++C+    + QWL+D GV +    P   H
Sbjct: 105 GIEDSVDAMVADMLR-AG---RGMNDVEMLKLVCNGTAESCQWLIDYGVHW---KPFVQH 157

Query: 125 -----RQPRMHNVLPNSRSFIYHLTRRARRAGVDIRTNTPVTALVRQDNGRVTGVD---- 175
                 Q  +  V  +    I  L + AR  GV ++  T +   V+ D GRV GV+    
Sbjct: 158 FGGHSVQRVLQTVESSGAGIIRPLIKAARDKGVIMKNQTKLEGFVKDDAGRVIGVEVREG 217

Query: 176 -------AGPL-RFSARGGVVLAAGDFTNGPAFKARFMGPQEAKVEGVN-VTATGDGQRL 226
                   G + R  AR GV++A G F     ++   +    + ++  N   AT +  + 
Sbjct: 218 FYFPNERTGKIRRIGARHGVIMATGGFGRDIEYRMMQLPELNSDLDSTNHAGATSEALKQ 277

Query: 227 GETGGARIVNGD-LALGPEIRFIAPATETFVRRLPPWRWLAVTMEWAMDRVPPVILRPIL 285
               GA  ++ D + LGP                           WA          P  
Sbjct: 278 MMLIGANPIHLDQIQLGP---------------------------WA---------SPDE 301

Query: 286 MKFLTTALAPSPTLFDAGAVLVNRRGERFGDE---RERPAWRLPDQPDKLGYILIDAALA 342
             F T +   +   +  G V+  R GERF +E   R+  A  +  + D+ G         
Sbjct: 302 KGFGTASQFNTIATYPHGIVVDVRTGERFFNELADRKARADAIMTRRDEKGQ-------- 353

Query: 343 QRFSVWPDFVSTAPGVAYAYVPDYRRNRPDVFTEAPTLEALAQRLGMDAAALK------R 396
               V+P   + A G + A   D+   +  V ++A TL+ LA+  GM A ALK       
Sbjct: 354 ---PVYPIGFTNAAGASKAQTLDWGL-KYKVISKAETLDELAKIYGMPAKALKAQVERWN 409

Query: 397 SAAEGGVR-----------ALGEGPYVALGPVRSVFVHSEGGLMVDAQHRVLG-ENDQPL 444
            A + GV             L +GP+ A+     V  +  GG+ V+ Q  VL   +++ +
Sbjct: 410 EAVKTGVDKEFERPMQEAIVLDKGPWYAVRMWPKVH-YCMGGVKVNTQSEVLHLVSNKAI 468

Query: 445 PGLYAAGSTGQGGLLLKGHGHH------LAWAFVSGRRAGRFAAEAVPTA 488
           PGLYAAG    GG+    HG        +A   V+GR AGR  A A   A
Sbjct: 469 PGLYAAGE-ATGGI----HGASRLGACAVAEGVVTGRNAGRNCAAASAVA 513