Pairwise Alignments

Query, 488 a.a., Fumarate reductase flavoprotein subunit (EC 1.3.99.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 589 a.a., fumarate reductase flavoprotein subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 95.5 bits (236), Expect = 4e-24
 Identities = 122/503 (24%), Positives = 197/503 (39%), Gaps = 83/503 (16%)

Query: 6   ETFDVVVVGGGGAGLAAAIEARESG-RSVVLLEKNPQPGGSTAWSIGSVTASGTPHQRRR 64
           E   V+V+G G AG AAAI AR+ G   VV+LEK P  GG++  + G ++A+ T  Q  +
Sbjct: 146 EQHQVIVIGAGAAGHAAAISARQHGVADVVILEKQPYIGGNSMLAAGGMSAAETVTQALK 205

Query: 65  GIVDSAADHWADMPGFAGDELAGRDNDALRRVLCDEIPATFQWLLDSGVRFMGPMPEPPH 124
              DS A  W +     G  +   +N  L ++L +   A   WL   G           H
Sbjct: 206 HYPDSKA-LWYEDTMKGGHNI---NNPDLVKILTENGSAGVDWLQAMGADLTSASSAGGH 261

Query: 125 RQPRMHNVLPNSRS---FIYHLTRRARRAGVDIRTNTPVTALVRQDNGRVTGV----DAG 177
              R+H     ++S    +  L   A++ GV+ RTN+ V  LV+   G +TGV       
Sbjct: 262 NAERLHRPTGGAKSGPEIVNTLKETAQKLGVETRTNSKVIQLVQNKQGVITGVLVQGKHS 321

Query: 178 PLRFSARGGVVLAAGDFTNGPAFKARFMGPQEAKVEGVNVTATGDGQRLGETGGARIVNG 237
            L       V++A+G F       A++    +      N    GD        GA IV+ 
Sbjct: 322 KLHILGAKAVIIASGGFARNNELVAKYRPDLKGVDATNNPGNVGDALTFAPKVGADIVD- 380

Query: 238 DLALGPEIRFIAPATETFVRRLPPWRWLAVTMEWAMDRVPPVILRPILMKFLTTALAPSP 297
                 EI+    A                                         +  S 
Sbjct: 381 ----VKEIQAFPTAA-------------------------------------AGKMVISG 399

Query: 298 TLFDAGAVLVNRRGERFGDE---RERPAWRLPDQPDKLGYILIDAALAQRFSVWPDFVST 354
           T   AGA+++N  GERF DE   R++ +  +  Q  K  +++ D  +  R       +  
Sbjct: 400 TARGAGAIMLNNDGERFCDEMGPRDKVSECIWAQKGKDAWLVFDETVLDRLGQLRGMLDL 459

Query: 355 APGVAYAYVPDYRRNRPDVFTEAPTLEALA-----------QRLGMDAAALKRSAAEGGV 403
             G+       ++ N  D   +A  + A             +  G DA   +++ A+   
Sbjct: 460 --GII------FKGNSADEMAKATKMNAQKFDQAIKRYNDFKVKGKDADFARKNMADD-- 509

Query: 404 RALGEGPYVALGPVRSVFVHSEGGLMVDAQHRVLGENDQPLPGLYAAGS-TGQGGLLLKG 462
               + P  A+  ++    H+ GGL ++ +  V+ +N  P+ GL+AAG  TG      + 
Sbjct: 510 ---LQYPIYAV-KIKPAVHHTMGGLKINTKTEVIDQNGLPIKGLFAAGEVTGGVHGANRL 565

Query: 463 HGHHLAWAFVSGRRAGRFAAEAV 485
            G+ +A   V GR AG   A ++
Sbjct: 566 AGNAIADTIVFGRIAGEQVANSI 588