Pairwise Alignments

Query, 488 a.a., Fumarate reductase flavoprotein subunit (EC 1.3.99.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 596 a.a., fumarate reductase flavoprotein subunit precursor (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  112 bits (279), Expect = 5e-29
 Identities = 136/518 (26%), Positives = 212/518 (40%), Gaps = 113/518 (21%)

Query: 5   EETFDVVVVGGGGAGLAAAIEARESGRSVVLLEKNPQPGGSTAWSIGSVTASGTPHQRRR 64
           +ET DVV++G GGAGLAAA+ AR++G  V+LLEK P PGG+T  + G + A+ T  Q + 
Sbjct: 148 KETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKL 207

Query: 65  GIVDSAADHWADMPGFAGDELAGRDN---DALRRVLCDEIPATFQWLLDSGV------RF 115
           GI D              D + G  N     L +VL +    +  WL   G       R 
Sbjct: 208 GIEDKKQI-------MIDDTMKGGRNINDPELVKVLANNSSDSIDWLTSMGADMTDVGRM 260

Query: 116 MGPMPEPPHRQPRMHNVLPNSRSFIYHLTRRARRAGVDIRTNTPVTALVRQDNGRVTGV- 174
            G      HR      V  +    ++     A + G DIR N+ V  ++   +G+VTGV 
Sbjct: 261 GGASVNRSHRPTGGAGVGAHVAQVLWD---NAVKRGTDIRLNSRVVRILEDASGKVTGVL 317

Query: 175 ---DAGPLRFSARGGVVLAAGDFTNGPAFKARFMGPQEAKVEGVNVT----ATGDGQRLG 227
              +           VV+AAG F       +++    + K++G   T    ATGDG  + 
Sbjct: 318 VKGEYTGYYVIKADAVVIAAGGFAKNNERVSKY----DPKLKGFKATNHPGATGDGLDVA 373

Query: 228 ETGGARIVNGDLALGPEIRFIAPATETFVRRLPPWRWLAVTMEWAMDRVPPVILRPILMK 287
              GA                A     +++  P +                    P    
Sbjct: 374 LQAGA----------------ATRDLEYIQAHPTY-------------------SPAGGV 398

Query: 288 FLTTALAPSPTLFDAGAVLVNRRGERFGDE---RERPAWRLPDQPDKLGYILIDAALAQR 344
            +T A+  +      GA++VNR G RF +E   R++ +  +  Q  +  Y++ D ++ + 
Sbjct: 399 MITEAVRGN------GAIVVNREGNRFMNEITTRDKASAAILQQKGESAYLVFDDSIRKS 452

Query: 345 FSVWPDFVSTAPGVAYAYVPDYRRNRPDVFTEAPTLEALAQRLGMDAAALKR--SAAEGG 402
                 +V                   ++  E  T+E LA+++ + AA L +  +A  G 
Sbjct: 453 LKAIEGYVHL-----------------NIVKEGKTIEELAKQIDVPAAELAKTVTAYNGF 495

Query: 403 V--------------RALGEGPYVALGPVRSVFVHSEGGLMVDAQHRVLGE-NDQPLPGL 447
           V              R L   P+ AL    +V  H+ GGL++D +  V  E   +P+ GL
Sbjct: 496 VKSGKDAQFERPDLPRELVVAPFYALEIAPAVH-HTMGGLVIDTKAEVKSEKTGKPITGL 554

Query: 448 YAAGST--GQGGLLLKGHGHHLAWAFVSGRRAGRFAAE 483
           YAAG    G  G    G G+ ++     GR AG  AA+
Sbjct: 555 YAAGEVTGGVHGANRLG-GNAISDIVTYGRIAGASAAK 591