Pairwise Alignments

Query, 302 a.a., transcriptional regulator, LysR family from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 304 a.a., LysR substrate-binding domain-containing protein from Dyella japonica UNC79MFTsu3.2

 Score =  174 bits (441), Expect = 2e-48
 Identities = 110/296 (37%), Positives = 159/296 (53%), Gaps = 8/296 (2%)

Query: 1   MIELRQLNQFVAVAEELNFRRAALRLHMSQPPLSHAIKRIEEAVGKPLFDRGRRHVRLTP 60
           M + RQL  FVAVAEEL+F RA+ RLH+SQPPLS  I+ +E  +G  L DR +R+V LT 
Sbjct: 1   MFDFRQLRYFVAVAEELSFTRASQRLHISQPPLSQQIQALEADLGVRLLDRDKRNVALTE 60

Query: 61  VGEIFLREARRTLAQAAHGMSLARRASDGTAGSIRLSFVASAALGP-LPDLVLLFRKAYP 119
            G +FL +AR+ LA+A    S   +A+ G +G +RL++  S    P LP  +L F +  P
Sbjct: 61  PGRVFLEQARQILAKADEARSQVSQAAAGFSGQLRLAYTVSVTFHPSLPQTLLRFGRHAP 120

Query: 120 GVEVLLDSDTTGGQLEALRRGATDIALI---VAPLQDAKGLVVDHFKEEKIVIALPSWHP 176
            V VLL    T  Q  AL  G  D+  +        D   L +D    E +++ALPS HP
Sbjct: 121 HVRVLLSEMYTEPQFAALLAGELDVGFVRDLPRHEADTHTLRIDEIDREPLLLALPSEHP 180

Query: 177 LASRKSIQLSQVATESFISFPFSAGPGFESIFLAACQRAGFFPKVVQEVSQMVTKIMLVA 236
           LA+R+ I L +VA   F+  P                +A F P + Q   Q+   +MLVA
Sbjct: 181 LAARRKIWLREVADAPFVVQPRELAATLYDRLTLIAAKADFHPLIRQHAQQINGLLMLVA 240

Query: 237 SGVGVALVPSSFAAMQMPHVTYVPVLEGRRPLRYSLAFATQARRD-NPLVESFLQL 291
           +G+G+AL+P+S   + +  V+YV + +   P  Y L      R D +P++  FL +
Sbjct: 241 AGMGLALIPASMCTVSLAGVSYVQLED---PDAYMLLAVASRREDTSPVLAQFLSV 293