Pairwise Alignments

Query, 662 a.a., Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 777 a.a., penicillin-binding protein 1B from Vibrio cholerae E7946 ATCC 55056

 Score =  283 bits (723), Expect = 3e-80
 Identities = 193/566 (34%), Positives = 292/566 (51%), Gaps = 19/566 (3%)

Query: 54  LRIHARDGSLLAEYGEERRQFVPIERIPQTMQNALLAIEDARFHEHGAVDYAGIARAALG 113
           LR+  +   +L +   E+R F+  ++ P+ + +ALL  ED  F++H  V    I RA + 
Sbjct: 162 LRLEPKLMGMLEKDSPEQRLFLRRDQFPEVLVDALLVTEDRDFYQHDGVSPLAIGRAMVV 221

Query: 114 NLVAGGHTQGASTITMQVARVFFLSREKTYRRKIMEILLAYKLEAAYSKGKILELYMNQI 173
           NL AG   QG ST+T Q+A+  FLS ++T  RK+ E  +A  ++  YSK +ILE Y+N++
Sbjct: 222 NLKAGRTVQGGSTLTQQLAKNIFLSSDRTLWRKLREAYMALIIDYRYSKDRILEAYLNEV 281

Query: 174 YLGERA----YGFAAAASVYFDKTLDQLSVAEAAMLAGLPKAPSAYNPVVNRERATVRQQ 229
           YLG+      +GF  A+ +YF + L +L + + A+L G+ K PS YNP+   ERA  R+ 
Sbjct: 282 YLGQSGADAIHGFGLASRLYFGQPLQELRIDQLALLVGMVKGPSYYNPMRYAERARERRD 341

Query: 230 HILKRMRELGHLDEPAHQQARAEPLTLRPRPPPADPATAHAVEQVRKMMVARFGDE-AYS 288
            +LK M E   L  P +QQA   PL ++     A    A+  +QV   +  + GD+    
Sbjct: 342 LVLKLMMEHDILTAPEYQQAVTRPLDVQKTAQIASRQPAY-FQQVSIELKEKLGDKFKAD 400

Query: 289 RGLDVTTTLDVAAQQAAARALR---TGLQKARRPQLEGALVSVDAKSGDILALVGGSDFA 345
            GL V T+LD  +Q    +A+      L K     LE A ++VD  SG+I A+VGG    
Sbjct: 401 SGLRVFTSLDPVSQSKLEQAIHDQIPQLAKTAGKDLEAAAIAVDRHSGEIRAMVGGKRTG 460

Query: 346 RNQFDHAVQAVRQPGSTFKPFVFSAAL--EKGYFPGTRIDDTQRLVTPAARGRKAWRPRN 403
            + F+  + A RQ GS  KP V+  AL     Y   T ++D + L    + G  AW PRN
Sbjct: 461 YDGFNRVLNASRQIGSLVKPAVYLTALAHPDQYNLATTLED-KPLTLKGSEG-SAWTPRN 518

Query: 404 YGHQYEGFITARRALARSKNVVAVNLMDAAGPEYVQQFATRFGFAAELNPPILPLALGAG 463
           Y  QY G +    ALA+S NV  V L    G + V     + G   +   P+  + LG+ 
Sbjct: 519 YDRQYRGEVPLYLALAQSLNVPTVALGMKLGIDQVSATLGKLGVNRDEIRPVPSMLLGSF 578

Query: 464 AVTPLQLTEAYAVFANEGERVESRLVLQVSERGGGVLYEAPTVAPR-AQVISPRNAHVMD 522
           ++TP Q+ + Y    N G++     +  V +  G VLYE+    PR +Q +  + A +  
Sbjct: 579 SLTPYQVAQMYQTLTNSGKKAPLSALRSVLDLEGNVLYES---LPRVSQAVDQQAAWLTT 635

Query: 523 SLLRDVVRQGTARRAQA-LGRADTAGKTGTSNDARDVWFAGYSSGIASVVWMGFDQARSL 581
             ++  V++GT R   A    A  AGKTGT+ND RD WF G      + +W+G D  +  
Sbjct: 636 YAMKQGVQEGTGRYLNAQFSSAALAGKTGTTNDNRDSWFVGVDGREVTTIWLGRDDNQPT 695

Query: 582 GNATGGSLALPVWTDYMKTAVADRPQ 607
              TG S AL V+  Y+K  + ++ Q
Sbjct: 696 -KLTGASGALRVYAQYLKYRIPEKLQ 720