Pairwise Alignments

Query, 340 a.a., Hypothetical protein with Rieske (2Fe-2S) region from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 343 a.a., Rieske (2Fe-2S) protein from Herbaspirillum seropedicae SmR1

 Score =  115 bits (289), Expect = 1e-30
 Identities = 95/337 (28%), Positives = 142/337 (42%), Gaps = 26/337 (7%)

Query: 4   RQLWHPVIASNQVRDQPVACSLLGQPLVLWREQAHDVHRVHAWADRCPHRGARLSLGRVL 63
           R+ W+ ++   Q+R  P   +LLG+ LV+W ++        A  DRC HR ARLS G V 
Sbjct: 10  RRFWYALMPIAQLRQGPQPFTLLGEKLVVWLKEDG---APAALQDRCCHRTARLSKGFVE 66

Query: 64  IGLHGTRLECPYHGWQFGGEGRCQHVPAAPDFVPPASHCAAVFEAREHHGLVWVRLETPS 123
            G     + C YHGW F GEG C  VP   D   PA  C   +  +E +G VWV LE P 
Sbjct: 67  NG----NIVCGYHGWTFNGEGACVRVPQNADGSVPAGACVKSYFCKERYGYVWVALEEP- 121

Query: 124 QVPAPALAEPPVFAPGDDPAWRTVVCGPYELNTSAPRLVENFLDLSHFGFVHEGWLGERG 183
                 L + P F     P +R +        TSA R++EN  D SHF +VH    G   
Sbjct: 122 ------LRDIPEFPEEGAPGYRRIFQFYERWETSALRMMENSFDNSHFSYVHRATFGLYD 175

Query: 184 HAQVQTGAVEEGEGASGLVVREARAWQPRAYAGADGGAWIAYRYDVPHPFAAILRK---- 239
             + +   + E +       R      P ++      A    R+     +   +R+    
Sbjct: 176 QPKPEKYEIAETDYGFEAETRVPIKNVPASHRVTGSTADTTVRHMFNRWYLPFVRRFGCT 235

Query: 240 --DATEGDPVSNAIALFIRPDGHELCTAWFVMATRGDTSTDQELIAFQDAVFAQDRPVVE 297
             ++     + N        DG  + + W       +  ++ ELIA+   +  +DR ++E
Sbjct: 236 YPESGRHHIIYNCATPI--DDGSIMLSQWLYRNDTEEECSEAELIAWDAPILVEDREILE 293

Query: 298 SQTPRA-LPVGRTLPVTEVHGPADRVSSAYRRYLNRL 333
           +  P A + V R     E H  +DR     RR L +L
Sbjct: 294 ATDPDACIDVRRR---QEFHMASDRPGLIMRRMLLQL 327