Pairwise Alignments

Query, 306 a.a., Nucleoside ABC transporter, permease protein 2 from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 278 a.a., putative permease protein from Phaeobacter inhibens DSM 17395

 Score =  137 bits (345), Expect = 3e-37
 Identities = 90/259 (34%), Positives = 129/259 (49%), Gaps = 22/259 (8%)

Query: 42  MLCAALAGFATVIHTGSTTLGFVAGMAAGALLAAIFGGLVIWLNTNQYATGLALSLFGAG 101
           ML AA    A    TG+  LG +AG+A+  +L+ + G   I    NQ  +G+A++   AG
Sbjct: 1   MLMAAFFSAAVAATTGNVWLGLLAGIASSLVLSGLHGLASITFRGNQLISGVAINFLAAG 60

Query: 102 F----------------SAFAGTGYVQEKLPEQTRHA-IPLLGDIPLIGPALFRHHPMVY 144
                            S F+G  +    LP     A +P+LG  P+    L  H  +VY
Sbjct: 61  MTVLIAQDWFQQGGRTPSLFSGGRFEPINLPFADALANVPVLG--PIYSELLSGHSVLVY 118

Query: 145 ICVALVIGLIWFLYRTRAGLVLRSVGESPESSHALGYPVRRIRLVAVMAGGALCGLAGAY 204
           +    V    W L+ TR GL LR+VGE+P +    G  V  +R  AVM  G LCG+AGAY
Sbjct: 119 LAFLAVPATAWVLFGTRFGLRLRAVGENPAAVDTAGVSVVGLRYAAVMICGLLCGIAGAY 178

Query: 205 VSTVYTPLWVEGMIAGKGWIALALTTFATWRPARVLLGAYLFGGVTMLQFHLQGIGVN-- 262
           ++T     +V+ M AG+G+IALA   FA WRP   L    LFG +  +    Q I +   
Sbjct: 179 LATALQAGFVKDMTAGRGFIALAALIFAKWRPWHALGACLLFGLLQAVALRFQNIEIGTF 238

Query: 263 -VPSQFLTMMPYVATIVVL 280
            +P Q +  +PY+ T+V+L
Sbjct: 239 VIPVQMMDALPYILTVVIL 257