Pairwise Alignments

Query, 306 a.a., Nucleoside ABC transporter, permease protein 2 from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 308 a.a., inner-membrane translocator (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  231 bits (589), Expect = 2e-65
 Identities = 119/279 (42%), Positives = 168/279 (60%), Gaps = 2/279 (0%)

Query: 7   LIAASLNAGTVLAIASLGLLINEKAGIVNLGAEGMMLCAALAGFATVIHTGSTTLGFVAG 66
           ++AA++ +GT +  A+LG +  E++G++NLG EGMM+  A +GF     TG+   G +A 
Sbjct: 11  ILAATVQSGTPILFATLGEMFTERSGVLNLGVEGMMIVGAFSGFLVTHITGNPWAGVLAA 70

Query: 67  MAAGALLAAIFGGLVIWLNTNQYATGLALSLFGAGFSAFAGTGYVQEKLPEQTRHAIPLL 126
              G  L+ + G + +    NQ  +GLAL++ G G + F GT YV          A+P+L
Sbjct: 71  GLCGGGLSLLHGVVCLIFQGNQVVSGLALTILGLGLADFLGTPYVGITTTGFQAFAVPVL 130

Query: 127 GDIPLIGPALFRHHPMVYICVALVIGLIW-FLYRTRAGLVLRSVGESPESSHALGYPVRR 185
            DIP++G   FRH  +VY+   L+  L W F+ RTR GL LR+ GE P ++ A G    R
Sbjct: 131 ADIPVLGAIFFRHDALVYLSY-LLPPLFWLFMARTRPGLALRAAGEHPAAASAAGLSPVR 189

Query: 186 IRLVAVMAGGALCGLAGAYVSTVYTPLWVEGMIAGKGWIALALTTFATWRPARVLLGAYL 245
           IR   +  GG L G+ GAY+S  YT LW   M +G+GWIA+AL  FA WRP R + GAYL
Sbjct: 190 IRWCGIFTGGFLAGIGGAYLSLAYTHLWTNNMTSGRGWIAVALVIFAFWRPGRAVFGAYL 249

Query: 246 FGGVTMLQFHLQGIGVNVPSQFLTMMPYVATIVVLVLIS 284
           FGGV  LQ  LQ +G N+PS  + M+PY  T++VL+  S
Sbjct: 250 FGGVMALQLRLQAMGANLPSSLMLMLPYALTVLVLLASS 288