Pairwise Alignments

Query, 389 a.a., Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  140 bits (354), Expect = 4e-38
 Identities = 98/330 (29%), Positives = 163/330 (49%), Gaps = 30/330 (9%)

Query: 49  EKVLNVYNWPDYITETLIADFEKEYGVKVNYDTFENNEALHAKL-VAGNSGYDIVIPTAG 107
           E+ LNVY W  Y+ E  +  FE++ GV +NY TFENNE+++ KL +   +GYD+V  +A 
Sbjct: 22  EQTLNVYAWGGYLPEKSLKAFEQQEGVTINYSTFENNESMYTKLKLLKGTGYDVVFASAY 81

Query: 108 FAKKQIDGGLYQPIDKSKLKNYGNLDTDFMAKIAGV--DPDNKHLVPWAWGFTTVGINKQ 165
           F +K    GL   ID +++ N      D M  + G+  DP NK  +P+ WG T +  N  
Sbjct: 82  FIEKMGREGLLAEIDHNQIPNM----KDAMPTVLGLAHDPQNKFSLPYIWGITGLYYNSS 137

Query: 166 KVEKALGGMPMPENAWDLVFKPEYSSKLKSCGIAYLDSPSEILPVALHYVGKPAYSENPE 225
            +     G+    + WD  ++ +         +  +D   ++  +AL   G    ++N E
Sbjct: 138 TLP---NGITKWADLWDKQYEQQ---------VMLIDDIRDVFGMALKLNGFSINTKNEE 185

Query: 226 DFKLAGEMLKKVRKDVRLFSSTMID-DIAGGKACAFIGWSGDINIAAGRVKETGGKDEIV 284
           + K A E L  ++K+V L++S         G+A   + W+G  N   G+V+      E+ 
Sbjct: 186 EIKKAYESLVALKKNVLLYNSDAPHVPYVSGEATLGMQWNG--NAYQGQVE----MPELK 239

Query: 285 PLLPTGGGLVFIDTMAIPKDAKHVNNAHVFMDFYLRAANAAAMANELNYPTGNKAALADI 344
            ++P  G ++++D   IP  +K++  AH F++F  +  N A +   L Y +  K   A +
Sbjct: 240 FVMPEEGAVLWMDNFTIPSGSKNIPLAHKFINFMYQPENQAEIVQSLGYASATKGGRALL 299

Query: 345 KDEVKGNKTTFLGPEDTARLIPTGGFSNDV 374
             E++ N T F   ED  +    G F NDV
Sbjct: 300 PAELRDNPTIFPSDEDMKK----GEFINDV 325