Pairwise Alignments

Query, 303 a.a., Putrescine transport system permease protein PotH (TC 3.A.1.11.2) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 306 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score =  302 bits (773), Expect = 7e-87
 Identities = 154/286 (53%), Positives = 199/286 (69%), Gaps = 10/286 (3%)

Query: 9   GKRFVIGVPYGWLILFFFLPFLILLYISFVDMGGDISPFKPIWDPVSGILS--LKYENYL 66
           G++ VIGVP+ WL LFF LPFLI+L ISF +    I P+  I+      L   L + NY 
Sbjct: 17  GRQMVIGVPFLWLFLFFALPFLIVLKISFAEADVAIPPYTEIFSYADEKLQMVLNFANYT 76

Query: 67  AIFRTEEGAPLFRTLYIDAYLRSIWYALCTAVLCLAIGYPFAYFIARSPASIRPALLLMV 126
            +   +        LY+ AYL S+  A  + +LCL IGYP AY IA +   ++  LLL++
Sbjct: 77  LLSGDD--------LYVSAYLGSLKMAFISTLLCLLIGYPMAYAIASARKDLQTVLLLLI 128

Query: 127 MLPFWTSFLLRVYAWKGILADQGVLNRLLMSIGLISEPIPMLYTNVSMLIGMTYVYLPFM 186
           M+P WT+ L+RVYAW GIL++ G+LN  LM +GLI  P+ +L TN+++ IG+ Y YLPFM
Sbjct: 129 MMPTWTAILIRVYAWMGILSNNGLLNAFLMWLGLIDAPLQILNTNLAVYIGVVYSYLPFM 188

Query: 187 ILPLYANLVKMDFRLLEAAYDLGTSPFKAFWLITVPLSKAGIIAGFMLVFIPCVGEFVIP 246
           ILPLYANLVK D  LLEAA DLG+S F +FW ITVPLSK G+IAG MLVFIP VGEFVIP
Sbjct: 189 ILPLYANLVKHDTSLLEAASDLGSSTFNSFWKITVPLSKNGVIAGCMLVFIPVVGEFVIP 248

Query: 247 SLLGGPENLMIGRVVWDEMFTANDWPRATALAVVMIALIVIPLALY 292
            LLGGPE LMIGRV+W E F   DWP A+ALAV+M+ ++++P+ L+
Sbjct: 249 ELLGGPETLMIGRVLWQEFFNNRDWPVASALAVIMLLVLIVPIILF 294