Pairwise Alignments

Query, 257 a.a., ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 561 a.a., nitrate ABC transporter, ATPase subunits C and D (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  187 bits (475), Expect = 4e-52
 Identities = 105/256 (41%), Positives = 153/256 (59%), Gaps = 13/256 (5%)

Query: 6   TVLHFDHVAIELGG----RQILSPTELTVKRGEFVCVIGPSGCGKTTLLRAAAGFVTPSQ 61
           T + F +V+   G       +L    LTVK GEF+ ++G SG GKTTL+   AG   P++
Sbjct: 2   TAIEFKNVSKSFGSGPNRADVLRDINLTVKEGEFLVLLGFSGTGKTTLINLMAGLEVPTK 61

Query: 62  GSVRRKGVPITGPSREVAFVFQDYGRALLPWRTVQANVSLALEAA--NVPAAERPARIEH 119
           G V  KG  IT PS E   +FQ+Y  +L+PW TV  NV LA++     +  A R A+++H
Sbjct: 62  GEVLFKGAQITEPSPERGVIFQNY--SLMPWLTVNGNVRLAVDTMFPKLSKAARQAKVDH 119

Query: 120 VLKTVGLAAHGHKYPAQLSGGMQQRVQIARCLAQRPDVMMMDEPFGALDAMTRETLQDEL 179
            +K VGL     + PA+LSGGM+QRV +AR LA  P+V+++DEP  ALDA+TR  L DE+
Sbjct: 120 YVKMVGLCHATTRRPAELSGGMRQRVNVARALAMNPEVLLLDEPLSALDALTRANLADEI 179

Query: 180 ARLVREEGLTVMFVTHDLEEALYLGDRVIALRSNPTPESPSLAALIDVPLPQPRDQLSTK 239
             +  +E  T + +T+D++EA+ L DR+IAL  + T     L     V +P+PRD++   
Sbjct: 180 EGIWEKEKKTCVLITNDVDEAIVLADRIIALNPDGT-----LGDEFAVTIPRPRDRVEMN 234

Query: 240 EHPEFLRLRRELYHYL 255
            H  F +LR ++  YL
Sbjct: 235 THVGFKKLRADITKYL 250



 Score =  166 bits (420), Expect = 1e-45
 Identities = 93/240 (38%), Positives = 144/240 (60%), Gaps = 7/240 (2%)

Query: 18  GGRQILSPTELTVKRGEFVCVIGPSGCGKTTLLRAAAGFVTPSQGSVRRKGVPITGPSRE 77
           G   ++   +L + +GEF+ +IG SGCGK+T+L  AAG    S+G+++  G  + G   E
Sbjct: 305 GPLTVVEDFDLKLNKGEFISLIGHSGCGKSTVLTMAAGLNEISKGAIKLDGRHVEGADPE 364

Query: 78  VAFVFQDYGRALLPWRTVQANVSLALEAA--NVPAAERPARIEHVLKTVGLAAHGHKYPA 135
            A VFQ    +L PW T + NVS+ ++    N   AER   +E+ L+ VGLA    K  A
Sbjct: 365 RAVVFQS--PSLFPWLTARENVSVGVDRVYPNASQAERQDVVEYYLERVGLADSMSKSGA 422

Query: 136 QLSGGMQQRVQIARCLAQRPDVMMMDEPFGALDAMTRETLQDELARLVREEGLTVMFVTH 195
           +LS GM+QRV IAR  A  P ++++DEPFG LD++TR  LQ+ L  +     +T + VTH
Sbjct: 423 ELSNGMKQRVGIARAFALSPKLLLLDEPFGMLDSLTRWELQEVLMEVWSRTKVTAICVTH 482

Query: 196 DLEEALYLGDRVIALRSNPTPESPSLAALIDVPLPQPRDQLSTKEHPEFLRLRRELYHYL 255
           D++EA+ L DRV+ + + P     ++  + DV LP+PR + +  EHP++   R+E+  +L
Sbjct: 483 DVDEAILLADRVVMMTNGP---RATIGKITDVNLPRPRTRKALLEHPDYYTYRQEVLDFL 539