Pairwise Alignments

Query, 500 a.a., Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 503 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  371 bits (953), Expect = e-107
 Identities = 208/492 (42%), Positives = 303/492 (61%), Gaps = 4/492 (0%)

Query: 8   IELRGIVKRFGPVQVLHGVDLAFEPGRVYGLLGENGAGKSTLMKILAGYEQPSEGALQVN 67
           I L GI K F  V+ L  V LA  PG V  L+GENGAGKSTL+KIL G  QP  G +++ 
Sbjct: 5   IALEGISKSFPGVRALSDVSLALYPGSVTALVGENGAGKSTLVKILTGIYQPDAGTIRLG 64

Query: 68  GRAVRFDGPRAAEAEGIVLIHQEFNLAEDLTVAQNIFLGHEKKRHGFWLDDSAMRATARR 127
                F    AA   G+  IHQE  L ++L+VA+NIFLGH  +     +D   + A A+ 
Sbjct: 65  DTETTFPTALAASRAGVTAIHQETVLFDELSVAENIFLGHAPRNRFGLIDWKQLNADAQA 124

Query: 128 VLDDVGLAKVHPDTRVRDLIVAERQLVEIAKALSRHARVLIMDEPTATLTPGETGRLFEL 187
           +L   G A   P  R+RDL +A++ LV IA+ALS  ARV+IMDEPTA L+  E   L++L
Sbjct: 125 LLGRAG-ADFDPTIRLRDLGIAKKHLVAIARALSVDARVVIMDEPTAALSHKEIHELYDL 183

Query: 188 VARLQADGVTVVFISHKLDEVERITEEVIVMRDGRLVAQQATATLTRAQMANLMVGRELA 247
           + RL+ADG  V+FISHK DE+ RI +   V RDG ++ +   A +++  +  +MVGR + 
Sbjct: 184 IERLKADGKAVLFISHKFDEIFRIADRYTVFRDGAMIGEGLIADVSQDDLVRMMVGRAVG 243

Query: 248 DLYPPRTEVPADAPVLLSVRALSVPGWAQDVSFEVRAGEVFGFAGLVGAGRTELFEGLLG 307
            +YP + EV    PVL +V     P   +D++FE+R GE+ GF GLVGAGR+E  + L+G
Sbjct: 244 SVYPKK-EVTIGQPVL-TVSGYRHPTEFEDINFELRRGEILGFYGLVGAGRSEFMQSLIG 301

Query: 308 LRERRAQAVQVAGRALLPRSPREAANAGLTYLSEDRKGRGLHVRFGLRENLTLMALQRHA 367
           +    A AV++ G  L+ RSP EA  AG+ Y+ E+R  +G  +   + +N+TL +L   +
Sbjct: 302 ITRPSAGAVKLDGEVLVIRSPAEAIRAGIVYVPEERGRQGAIIGMPIFQNVTLPSLSHTS 361

Query: 368 RP-WLQPASEVAALAQAVREFGIRTGSLDVPAGSLSGGNQQKLALAKVLHPDPRVVVLDE 426
           R  +L+ A E A   +      +R  +LD   G+LSGGNQQK+ +AK L   P+V++LDE
Sbjct: 362 RSGFLRLAEEFALAREYTSRLDLRAAALDQDVGTLSGGNQQKVVIAKWLATRPKVIILDE 421

Query: 427 PTRGVDIGAKRDIYALIQRLAASGRAVVVISSELMELIGLCHRVAVMRSGRLQATLSAAD 486
           PT+G+DIG+K  ++A +  LAA G +V+++SSE+ E++G+  RV VMR GR+      ++
Sbjct: 422 PTKGIDIGSKAAVHAFMSELAAQGLSVIMVSSEIPEIMGMSDRVIVMREGRVAGRYERSE 481

Query: 487 LNEQELIAHATG 498
           L  ++L+  A G
Sbjct: 482 LTAEKLVRAAAG 493



 Score = 91.7 bits (226), Expect = 6e-23
 Identities = 68/226 (30%), Positives = 110/226 (48%), Gaps = 8/226 (3%)

Query: 27  DLAFE--PGRVYGLLGENGAGKSTLMKILAGYEQPSEGALQVNGRAVRFDGPRAAEAEGI 84
           D+ FE   G + G  G  GAG+S  M+ L G  +PS GA++++G  +    P  A   GI
Sbjct: 271 DINFELRRGEILGFYGLVGAGRSEFMQSLIGITRPSAGAVKLDGEVLVIRSPAEAIRAGI 330

Query: 85  VLIHQEFNLAE---DLTVAQNIFLGH--EKKRHGFWLDDSAMRATARRVLDDVGLAKVHP 139
           V + +E         + + QN+ L       R GF L  +   A AR     + L     
Sbjct: 331 VYVPEERGRQGAIIGMPIFQNVTLPSLSHTSRSGF-LRLAEEFALAREYTSRLDLRAAAL 389

Query: 140 DTRVRDLIVAERQLVEIAKALSRHARVLIMDEPTATLTPGETGRLFELVARLQADGVTVV 199
           D  V  L    +Q V IAK L+   +V+I+DEPT  +  G    +   ++ L A G++V+
Sbjct: 390 DQDVGTLSGGNQQKVVIAKWLATRPKVIILDEPTKGIDIGSKAAVHAFMSELAAQGLSVI 449

Query: 200 FISHKLDEVERITEEVIVMRDGRLVAQQATATLTRAQMANLMVGRE 245
            +S ++ E+  +++ VIVMR+GR+  +   + LT  ++     G E
Sbjct: 450 MVSSEIPEIMGMSDRVIVMREGRVAGRYERSELTAEKLVRAAAGIE 495