Pairwise Alignments

Query, 500 a.a., Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 503 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  385 bits (988), Expect = e-111
 Identities = 214/500 (42%), Positives = 327/500 (65%), Gaps = 6/500 (1%)

Query: 2   AGAGVRIELRGIVKRFGPVQVLHGVDLAFEPGRVYGLLGENGAGKSTLMKILAGYEQPSE 61
           + A   +++  + K FG V  L G+ L    GRV+ LLGENGAGKSTLMKILAG    + 
Sbjct: 4   SAADTILKITDVTKSFGQVAALKGMRLEVRRGRVHTLLGENGAGKSTLMKILAGVHGATS 63

Query: 62  GALQVNGRAVRFDGPRAAEAEGIVLIHQEFNLAEDLTVAQNIFLGHEKKRHGFWLDDSAM 121
           G + ++G+A R   P+ A + G+ ++ QE +L  +LTVA+NI    E +R GF ++D A+
Sbjct: 64  GEIVLDGQAYRPANPQEAASLGLAIVFQELSLCNNLTVAENILATREPRRFGF-INDKAL 122

Query: 122 RATARRVLDDVGLAKVHPDTRVRDLIVAERQLVEIAKALSRHARVLIMDEPTATLTPGET 181
            A A R++ D+ L  +    +V +L +A+RQLVEIAK LS  A+V+I+DEPT++L+  E 
Sbjct: 123 VAKAHRIVADLRLP-IDVTEKVGNLSIAQRQLVEIAKGLSHDAKVVILDEPTSSLSDSEA 181

Query: 182 GRLFELVARLQADGVTVVFISHKLDEVERITEEVIVMRDGRLVAQQATATLTRAQMANLM 241
             LFE++ RL+  G  +++ISH+++E+ R+++++ V+RDG  V+  A   +T   +  LM
Sbjct: 182 EILFEIIGRLRQRGAAIIYISHRMEEIMRLSDDITVIRDGEYVSTHARDEVTIETLIALM 241

Query: 242 VGRELADLYPPRTE-VPADAPVLLSVRALSVPGWAQDVSFEVRAGEVFGFAGLVGAGRTE 300
           VGR + ++YPP    V AD   +L+V  L+  G  QDVSF+VRAGE+ GF GLVG+GR+E
Sbjct: 242 VGRRMDEIYPPPVHHVAADRAPVLAVDRLTREGEFQDVSFDVRAGEILGFFGLVGSGRSE 301

Query: 301 LFEGLLGLRERRAQAVQVAGRALLPRSPREAANAGLTYLSEDRKGRGLHVRFGLRENLTL 360
           +   L G++   A  V++ G  +  RSP +A   G+ +++E+RK  GL +   +  N+++
Sbjct: 302 VMNALFGMKSA-AGTVRLDGEVVRFRSPDQAIARGVGFVTENRKEEGLVLGHSVEWNISM 360

Query: 361 MALQRHARP--WLQPASEVAALAQAVREFGIRTGSLDVPAGSLSGGNQQKLALAKVLHPD 418
            AL   A    +++  +E AA ++ V +  I+T SL+ PAG+LSGGNQQK+ LAK L   
Sbjct: 361 AALADFAGGLGFIRNGAERAAASEQVGKLSIKTNSLETPAGALSGGNQQKIVLAKWLLTR 420

Query: 419 PRVVVLDEPTRGVDIGAKRDIYALIQRLAASGRAVVVISSELMELIGLCHRVAVMRSGRL 478
           P+V++LDEPTRGVD+GAK +IY +I+ LAA G A+++ISS+L E++G+  RV VM  G  
Sbjct: 421 PKVLILDEPTRGVDVGAKFEIYKIIRELAAEGTAILLISSDLPEVLGMSDRVVVMHEGAP 480

Query: 479 QATLSAADLNEQELIAHATG 498
            ATL  + L  + ++AHATG
Sbjct: 481 GATLEGSALTPETIMAHATG 500