Pairwise Alignments

Query, 500 a.a., Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 508 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  447 bits (1151), Expect = e-130
 Identities = 246/496 (49%), Positives = 331/496 (66%), Gaps = 4/496 (0%)

Query: 4   AGVRIELRGIVKRFGPVQVLHGVDLAFEPGRVYGLLGENGAGKSTLMKILAGYEQPSEGA 63
           A V +E R I K F  VQVL  V+     G ++ L+GENGAGKSTL+KIL+G+EQPS G 
Sbjct: 9   ARVVLEARRISKSFSGVQVLFSVNFELRAGEIHALMGENGAGKSTLVKILSGFEQPSSGE 68

Query: 64  LQVNGRAVRFDGPRAAEAEGIVLIHQEFNLAEDLTVAQNIFLGHEKKRHGFWLDDSAMRA 123
           + ++G+ V      AAEA GIV+IHQEFNLAE LTVA+++FLG E  R G  LD   MRA
Sbjct: 69  VLLDGQPVTLPANGAAEALGIVIIHQEFNLAEHLTVAESLFLGREVTRFGV-LDRKYMRA 127

Query: 124 TARRVLDDVGLAKVHPDTRVRDLIVAERQLVEIAKALSRHARVLIMDEPTATLTPGETGR 183
             RRVLD +G   V  +  +  L +AE+Q+VEIAKA+SR AR++ MDEPTA L+  ET  
Sbjct: 128 ETRRVLDLLG-CHVDANALIGSLSIAEKQMVEIAKAISRDARIVFMDEPTAVLSREETNF 186

Query: 184 LFELVARLQADGVTVVFISHKLDEVERITEEVIVMRDGRLVAQQATATLTRAQMANLMVG 243
           LF  V +L+  G + VF+SHKLDEV  +T+ V V+RDG+ V   AT+ L    +A LMVG
Sbjct: 187 LFRQVRKLRDRGTSFVFVSHKLDEVIELTDRVTVLRDGQWVKTAATSMLDGESIAQLMVG 246

Query: 244 RELADLYPPRTEVPADAPVLLSVRALSVPGWAQDVSFEVRAGEVFGFAGLVGAGRTELFE 303
           RE++ L+P + E   D  V+L V A+S   + QD  FEVR GE+ GF+G++G+GRTEL E
Sbjct: 247 REMSSLFPAKKEPNVDEEVVLRVDAVSTD-YVQDARFEVRKGEILGFSGMIGSGRTELME 305

Query: 304 GLLGLRERRAQAVQVAGRALLPRSPREAANAGLTYLSEDRKGRGLHVRFGLRENLTLMAL 363
            + GLR R +  V + G  +       A   GL Y+++DRK +GL +  G+  NLTL +L
Sbjct: 306 AVAGLRPRLSGEVTIRGETVPSGDVHAANRRGLAYMTKDRKAKGLLLNSGMTANLTLQSL 365

Query: 364 QRHAR-PWLQPASEVAALAQAVREFGIRTGSLDVPAGSLSGGNQQKLALAKVLHPDPRVV 422
            RHAR  +L PASE AAL +A R F IR    +V A  +SGGNQQKL LAKV+  +P ++
Sbjct: 366 GRHARIGYLSPASEAAALKRARRRFDIRVRDGNVVARRMSGGNQQKLLLAKVMETEPDII 425

Query: 423 VLDEPTRGVDIGAKRDIYALIQRLAASGRAVVVISSELMELIGLCHRVAVMRSGRLQATL 482
           ++DEPTRG+D+G K+ IY  I  LA  GR+++V+SSE+ E+IGLC RVAVMR GR+   L
Sbjct: 426 IIDEPTRGIDVGTKQQIYHFISALARDGRSIIVVSSEMPEVIGLCTRVAVMREGRIVGML 485

Query: 483 SAADLNEQELIAHATG 498
              +++EQE++ +A G
Sbjct: 486 EGDEISEQEIMRYAAG 501