Pairwise Alignments

Query, 320 a.a., Ribose ABC transporter, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 322 a.a., sugar uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score =  106 bits (265), Expect = 7e-28
 Identities = 93/318 (29%), Positives = 151/318 (47%), Gaps = 19/318 (5%)

Query: 1   MKYRSRLLALAAVAALGMASPLLAQAQNKVNLGVAIPAATHSFAAGLVYWANEAKKELEK 60
           +K  +    LAA  AL  A   LAQ   K  +G +       + A    +  +   E  K
Sbjct: 7   LKLTAVAAVLAATTALMPADDALAQ-DKKFRIGFSQATTIEPWRA---QFNKDIIAEAAK 62

Query: 61  DPNIKVTIKTASGAPE-QANQLQDLVTATKIDSLVILPFESAALTRPVQQVKAKGVYVTV 119
            P++++ I       E Q   +++L+   ++D+L++ P ESA LT  VQQ     + V V
Sbjct: 63  HPDVELIITDGEDRTEKQVADVENLIRQ-EVDALLVSPKESAGLTGVVQQAIDAKIPVFV 121

Query: 120 VDRGLTDTSAQDAYVSGDNTAFGKVPAEYLAKALNGKG----NIVAL-RGIPTTIDNERM 174
           +DR + +T     +V GDN   G+   EY  + L GKG    NIV +  G+ T   ++R 
Sbjct: 122 LDRNV-ETDQYTQFVGGDNKLIGRAAGEYAVELLGGKGKAEGNIVEIWGGMGTQPAHDRH 180

Query: 175 DAFNAVMKNHPGIK-VLDAKHGNWNRDDAFKVMQDFLTRFKEIDAVWAADDDMAFGVLRA 233
           D F+      PGIK +LD + G+W +D A+ +M   L   ++ID V+  +D MA+G   A
Sbjct: 181 DGFHEFTDKEPGIKNLLDQQSGDWKQDQAYNIMATALRNNEKIDLVYGHNDPMAYGAYLA 240

Query: 234 IEQAKR-KDIKIVFGGAGAKAMVKTLMDGTNPLIQANVSYSPKFLYDAIKMTALARKKGE 292
            + A R K++K +   A     V  + +G         +   + L  A+K       KGE
Sbjct: 241 AKDAGREKEMKFIGIDALPNEGVTWVNNGELTATFLYATPGAEGLRQAVKFL-----KGE 295

Query: 293 KLPASTIVPSVLITKANA 310
           K+  +  + ++ +TK NA
Sbjct: 296 KVEKTVTLDTMKVTKENA 313