Pairwise Alignments

Query, 320 a.a., Ribose ABC transporter, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 325 a.a., fructose ABC transporter, substrate-binding component (FrcB) (from data) from Cupriavidus basilensis FW507-4G11

 Score =  116 bits (290), Expect = 8e-31
 Identities = 97/318 (30%), Positives = 155/318 (48%), Gaps = 23/318 (7%)

Query: 5   SRLLALAAVAALGMASPLLAQAQNKVN-LGVAIPAATHSFAAGLVYWANEAKKELEKDPN 63
           S L   AA  +   A+P  A AQ  +  +GV + +  + +   L + A  A K++  +P+
Sbjct: 15  SLLCTGAAAQSAPDAAPASAAAQRPLKKVGVTLGSLGNPYFVALAHGAEAAAKKI--NPD 72

Query: 64  IKVTIKTASGAPEQANQLQDLVTATKIDSLVILPFESAALTRPVQQVKAKGVYVTVVDRG 123
            KVT+ +A     +     D    +K+D ++I   ++ A+   V++ +  G+ V  VD  
Sbjct: 73  AKVTVLSADYDLNKQFSHIDSFIVSKVDLILINAADARAIEPAVRKARKAGIVVVAVD-- 130

Query: 124 LTDTSAQDAYVSGDNTAFGKVPAEYLAKALNGKGNIVALRGIPTTIDNERMDAFNAVMKN 183
               +  DA V  DNT  G++   +LA  L G+GN++   G P +   +R+     V+  
Sbjct: 131 -VAAAGADATVQTDNTRAGELACAFLAGRLGGRGNLIIQNGPPVSAVLDRVKGCKMVLGK 189

Query: 184 HPGIKVL-DAKHGNWNRDDAFKVMQDFLTRFKEIDAVWAADDDMAFGVLRAIEQAKRKDI 242
           HPGI VL D + G  +R+    VMQ +LTRF +IDAV+  +D  A G   A  Q  R  I
Sbjct: 190 HPGIHVLSDDQDGKGSREGGLNVMQLYLTRFPKIDAVFTINDPQAVGADLAARQLNRGGI 249

Query: 243 KI--VFGGAGAKAMVKTLMDGTNPLIQANVSYSPKFLYDAIKMTALARKKG---EKLPA- 296
            I  V G    +A +K      N L+QA+ S  P     AI  TA+    G    + PA 
Sbjct: 250 LIASVDGAPDIEAALK-----ANTLVQASASQDPW----AIARTAVEIGVGLMHGQAPAN 300

Query: 297 -STIVPSVLITKANAKDF 313
            + ++P  L+T+AN  ++
Sbjct: 301 RTVLLPPTLVTRANVNEY 318