Pairwise Alignments

Query, 309 a.a., Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 351 a.a., ABC-type dipeptide/oligopeptide/nickel transport systems permease components-like from Synechococcus elongatus PCC 7942

 Score =  184 bits (468), Expect = 2e-51
 Identities = 102/243 (41%), Positives = 152/243 (62%), Gaps = 18/243 (7%)

Query: 70  PSARYLLGTDEIGRDVLLRLMYGGQISLAVGVLATLFGAVIGVAIGVLAGFVGGRTDAFL 129
           P   +LLGTD+ GRD   RL+YG +ISL+VG++  +    +G+ +G +AG+ GG  DA +
Sbjct: 120 PGKLHLLGTDDQGRDQFSRLLYGSRISLSVGLVGVILTFPLGILVGGIAGYWGGWVDALI 179

Query: 130 MRATDCMIALPLVPLLVVMAAIDLSKLGVPHDLAQSPMVSFWRIVIIISLVDWTTIARVV 189
           MR  + ++ +P + LLV +AA+      +P  L+ +    F  IV I SL++W  +ARV+
Sbjct: 180 MRLVEVLMTIPSLYLLVALAAV------LPPGLSSAER--FLLIVAITSLINWAGLARVI 231

Query: 190 RAGTLTVRGQDYVLSARVSGGSGLYNILTHVLPNVATPIIVASTLTVSRVILLESTLSFL 249
           R   L++R ++YV +++V G S LY ++ H+LP   T +I+A+TL V   I+ ES LS +
Sbjct: 232 RGQVLSLREREYVQASQVMGASRLYLLIRHILPQTLTYVIIAATLAVPSFIVAESVLSLV 291

Query: 250 GVGVMPPTPTWGNMLNNAQELATTAPMLAVY------PGLLIFVTVIAFNFLGDGLRVAF 303
           G+G+  P P+WGNML+    LAT A ML +       P LLI V V+AFN +GDGLR   
Sbjct: 292 GLGIQQPDPSWGNMLS----LATNASMLLLNPWLIWPPALLIVVAVLAFNVVGDGLRDRL 347

Query: 304 DPR 306
           DPR
Sbjct: 348 DPR 350